RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 PCDHA2Q9Y5H9 948 aa17.09■□□□□ 0.33
PTP4A1-201ENST00000370651 PLK4O00444 970 aa17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 PMM2O15305 246 aa17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 RPP40O75818 363 aaKnown RBP17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 CKBP12277 381 aa17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 RAB25P57735 213 aa17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 ECT2LQ008S8 904 aa17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 IL18R1Q13478 541 aa17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 INTS6LQ5JSJ4 861 aaKnown RBP17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 ANXA8L1Q5VT79 327 aa17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 RAB43Q86YS6 212 aa17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 WDR48Q8TAF3 677 aa17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 MBD2Q9UBB5 411 aa17.08■□□□□ 0.33
PTP4A1-201ENST00000370651 AGRPO00253 132 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 PKMP14618 531 aaKnown RBP17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 ACLYP53396 1101 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 SLC9B1Q4ZJI4 515 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 MFSD4BQ5TF39 518 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 LYPLAL1Q5VWZ2 237 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 ERI1Q8IV48 349 aaKnown RBP17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 OR52L1Q8NGH7 329 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 TPK1Q9H3S4 243 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 AGO3Q9H9G7 860 aaKnown RBP17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 AGO1Q9UL18 857 aaKnown RBP17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 TCAF1Q9Y4C2 921 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 MYO5BQ9ULV0 1848 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 ELP6Q0PNE2 266 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 TYSND1Q2T9J0 566 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 SETMARQ53H47 684 aaPredicted RBP17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 KLHDC10Q6PID8 442 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 ZNF438Q7Z4V0 828 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 RBFAQ8N0V3 343 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 CCDC185Q8N715 623 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 TRIM17Q9Y577 477 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 FANCGO15287 622 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 DYRK3O43781 588 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 SLC7A1P30825 629 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 CLCQ05315 142 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 FCHO2Q0JRZ9 810 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 IL23RQ5VWK5 629 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 RHBDF2Q6PJF5 856 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 LRTM1Q9HBL6 345 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 EIF2B3Q9NR50 452 aaKnown RBP17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 DNMT3LQ9UJW3 386 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 SLC9A8Q9Y2E8 581 aa17.08■□□□□ 0.32
PTP4A1-201ENST00000370651 CCDC162PA2VCL2 907 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 NMBRP28336 390 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 RCVRNP35243 200 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 PITRM1Q5JRX3 1037 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 TMEM214Q6NUQ4 689 aaKnown RBP17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 AHSA2Q719I0 299 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 NXF3Q9H4D5 531 aaKnown RBP17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 NR2F1P10589 423 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 KLRC2P26717 231 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 THOP1P52888 689 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 TSPAN9O75954 239 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 HOXC6P09630 235 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 PRG2P13727 222 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 ITGAXP20702 1163 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 R3HCC1LQ7Z5L2 792 aaKnown RBP17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 PYROXD2Q8N2H3 581 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 PIK3C3Q8NEB9 887 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 HEXDCQ8WVB3 486 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 NDRG1Q92597 394 aaKnown RBP17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 TAMM41Q96BW9 452 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 PCDHAC1Q9H158 963 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 ZDHHC6Q9H6R6 413 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 PLK2Q9NYY3 685 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 ZNF232Q9UNY5 417 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 TELO2Q9Y4R8 837 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 UBE2QL1A1L167 161 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 H7C0S8 307 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 PCDH8O95206 1070 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 CHRNGP07510 517 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 NCK1P16333 377 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 ARL2P36404 184 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 PFKPQ01813 784 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 LGALS3BPQ08380 585 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 TRIM32Q13049 653 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 GNA13Q14344 377 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 HECTD3Q5T447 861 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 ERICH5Q6P6B1 374 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 TRIM74Q86UV6 250 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 TRIM73Q86UV7 250 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 TEFMQ96QE5 360 aaKnown RBP17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 RAD18Q9NS91 495 aa17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 ZNF490Q9ULM2 529 aaPredicted RBP17.07■□□□□ 0.32
PTP4A1-201ENST00000370651 NFAT5O94916 1531 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 FAM240BA0A1B0GVZ2 78 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 KPNA3O00505 521 aaPredicted RBP17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 KLF11O14901 512 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 KIR3DL1P43629 444 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 PSMD4P55036 377 aaKnown RBP17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 ESRP1Q6NXG1 681 aaKnown RBP17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 FAM20CQ8IXL6 584 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 NIPA2Q8N8Q9 360 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 EEF1AKMT1Q8WVE0 214 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 ATP13A3Q9H7F0 1226 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms