RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 TUBB4BP68371 445 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 SLC7A5Q01650 507 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 PDE1CQ14123 709 aaPredicted RBP15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 CCDC38Q502W7 563 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 ALS2CLQ60I27 953 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 OR13C4Q8NGS5 318 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 DNAJC1Q96KC8 554 aaKnown RBP15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 VPS35Q96QK1 796 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 PHOX2BQ99453 314 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 FAM129AQ9BZQ8 928 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 ERVMER34-1Q9H9K5 563 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 GDF3Q9NR23 364 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 CHRAC1Q9NRG0 131 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 PHPT1Q9NRX4 125 aaPredicted RBP15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 SEMA4GQ9NTN9 838 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 SYBUQ9NX95 663 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 SOX13Q9UN79 622 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 KCTD3Q9Y597 815 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 SPTY2D1-AS1A0A0U1RR47 76 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 A0A1B0GVT2 93 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 PATE3B3GLJ2 98 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 ARHGAP33O14559 1287 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 ARL4CP56559 192 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 CDK3Q00526 305 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 GUCY2DQ02846 1103 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 ACVR1Q04771 509 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 SPEM2Q0P670 501 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 CBLBQ13191 982 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 PTPRCAPQ14761 206 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 NFATC4Q14934 902 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 HIF1AQ16665 826 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 HEATR4Q86WZ0 1026 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 CCNJLQ8IV13 435 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 PELI3Q8N2H9 469 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 OXR1Q8N573 874 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 ART4Q93070 314 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 FUBP1Q96AE4 644 aaKnown RBP15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 LRRC39Q96DD0 335 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 CDKN2AIPNLQ96HQ2 116 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 HIC2Q96JB3 615 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 AGAP2Q99490 1192 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 HINFPQ9BQA5 517 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 NAT9Q9BTE0 207 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 FAM114A2Q9NRY5 505 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 GRHL1Q9NZI5 618 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 FKBPLQ9UIM3 349 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 OR1A2Q9Y585 309 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 MYO15AQ9UKN7 3530 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 FAM237BA0A1B0GVD1 139 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 FADS2P1A8MWK0 482 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 DFNA5O60443 496 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 SRP72O76094 671 aaKnown RBP15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 PRAMEF1O95521 474 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 CTSKP43235 329 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 CRADDP78560 199 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 XIAPP98170 497 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 GRIK2Q13002 908 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 KIF19Q2TAC6 998 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 CASC4Q6P4E1 433 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 LAYNQ6UX15 382 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 FAM151BQ6UXP7 276 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 MACC1Q6ZN28 852 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 ASCL5Q7RTU5 278 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 PARGQ86W56 976 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 SLC22A18ASQ8N1D0 253 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 OR13J1Q8NGT2 312 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 SIGLEC10Q96LC7 697 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 FOXP3Q9BZS1 431 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 PHACTR1Q9C0D0 580 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 TREX1Q9NSU2 369 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 SMOXQ9NWM0 555 aa15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 FNDC3AQ9Y2H6 1198 aaKnown RBP15.44■□□□□ 0.06
PRPF38B-202ENST00000370022 DMDP11532 3685 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 BHMG1C9JSJ3 638 aaPredicted RBP15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 PAMP19021 973 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 IRX4P78413 519 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 TMPRSS15P98073 1019 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 NFATC2Q13469 925 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 PEX6Q13608 980 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 CHRNA6Q15825 494 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 CCDC6Q16204 474 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 GPR33Q49SQ1 333 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 FNBP1LQ5T0N5 605 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 SNX20Q7Z614 316 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 PHYKPLQ8IUZ5 450 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 ZNF398Q8TD17 642 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 BTN2A2Q8WVV5 523 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 GLYATL1Q969I3 302 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 STAMBPL1Q96FJ0 436 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 SGSM3Q96HU1 749 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 COX14Q96I36 57 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 WDR92Q96MX6 357 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 EPB41L5Q9HCM4 733 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 DMGDHQ9UI17 866 aaKnown RBP15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 SNX11Q9Y5W9 270 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 SLC30A1Q9Y6M5 507 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 SCN8AQ9UQD0 1980 aa15.43■□□□□ 0.06
PRPF38B-202ENST00000370022 AGAP14A8MT82 685 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 GAPDHSO14556 408 aaPredicted RBP15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 TNFRSF10CO14798 259 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms