RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 C9orf57Q5W0N0 161 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 FAM35AQ86V20 835 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 PIK3C3Q8NEB9 887 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 RAET1EQ8TD07 263 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 OR52B2Q96RD2 323 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 PKP2Q99959 881 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 GPC6Q9Y625 555 aaPredicted RBP15.88■□□□□ 0.13
COL17A1-202ENST00000369733 OR6B1O95007 311 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 RPLP2P05387 115 aaKnown RBP15.87■□□□□ 0.13
COL17A1-202ENST00000369733 MC4RP32245 332 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 CTSKP43235 329 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 CLCQ05315 142 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 CHMP1BQ7LBR1 199 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 ELMO1Q92556 727 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 SKA1Q96BD8 255 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 SHISA4Q96DD7 197 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 PIP5K1BO14986 540 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 AIREO43918 545 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 EPORP19235 508 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 ARL2P36404 184 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 MPP2Q14168 576 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 SH3PXD2AQ5TCZ1 1133 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 TXNRD3NBQ6F5E7 133 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 RHBDF2Q6PJF5 856 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 SVOPLQ8N434 492 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 CD320Q9NPF0 282 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 PTCH2Q9Y6C5 1203 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 DNAJA2O60884 412 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 PTPN3P26045 913 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 IL1R2P27930 398 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 BNIP3Q12983 259 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 LCP2Q13094 533 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 LDB1Q86U70 411 aaPredicted RBP15.87■□□□□ 0.13
COL17A1-202ENST00000369733 SLC34A3Q8N130 599 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 TMEM169Q96HH4 297 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 PLK4O00444 970 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 TP73O15350 636 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 PAGE1O75459 146 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 ECHS1P30084 290 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 STAT5AP42229 794 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 DCLRE1AQ6PJP8 1040 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 DET1Q7L5Y6 550 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 TOP6BLQ8N6T0 577 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 LRRC15Q8TF66 581 aa15.87■□□□□ 0.13
COL17A1-202ENST00000369733 MOV10Q9HCE1 1003 aaKnown RBP15.87■□□□□ 0.13
COL17A1-202ENST00000369733 WRAP73Q9P2S5 460 aaPredicted RBP15.87■□□□□ 0.13
COL17A1-202ENST00000369733 IGKV6D-41A0A0C4DH26 115 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 ALDH2P05091 517 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 PSEN2P49810 448 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 ACLYP53396 1101 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 COPZ1P61923 177 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 GAD2Q05329 585 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 ELP6Q0PNE2 266 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 CA9Q16790 459 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 MTSS1LQ765P7 747 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 SEC14L1Q92503 715 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 SLC7A5P2Q9GIP4 190 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 INTS10Q9NVR2 710 aaKnown RBP15.86■□□□□ 0.13
COL17A1-202ENST00000369733 OXSMQ9NWU1 459 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 MFHAS1Q9Y4C4 1052 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 ZNF99A8MXY4 864 aaPredicted RBP15.86■□□□□ 0.13
COL17A1-202ENST00000369733 STX16-NPEPL1H3BU86 382 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 RPP40O75818 363 aaKnown RBP15.86■□□□□ 0.13
COL17A1-202ENST00000369733 DARSP14868 501 aaKnown RBP15.86■□□□□ 0.13
COL17A1-202ENST00000369733 TGM3Q08188 693 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 ESRP1Q6NXG1 681 aaKnown RBP15.86■□□□□ 0.13
COL17A1-202ENST00000369733 PLET1Q6UQ28 207 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 ZBTB8BQ8NAP8 495 aaPredicted RBP15.86■□□□□ 0.13
COL17A1-202ENST00000369733 SPATA22Q8NHS9 363 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 ITFG2Q969R8 447 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 GLT1D1Q96MS3 346 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 SLC38A2Q96QD8 506 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 SLITRK2Q9H156 845 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 PLIN4Q96Q06 1357 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 SGTAO43765 313 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 CATP04040 527 aaKnown RBP15.86■□□□□ 0.13
COL17A1-202ENST00000369733 EPHB3P54753 998 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 KCNJ11Q14654 390 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 BRMS1LQ5PSV4 323 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 GPR156Q8NFN8 814 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 EXOC2Q96KP1 924 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 FEM1AQ9BSK4 669 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 TPK1Q9H3S4 243 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 NXF3Q9H4D5 531 aaKnown RBP15.86■□□□□ 0.13
COL17A1-202ENST00000369733 DERAQ9Y315 318 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 FAM159BA6NKW6 160 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.86■□□□□ 0.13
COL17A1-202ENST00000369733 FABP3P05413 133 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 GNPDA1P46926 289 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 DAW1Q8N136 415 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 EMID1Q96A84 441 aaPredicted RBP15.86■□□□□ 0.13
COL17A1-202ENST00000369733 AGO3Q9H9G7 860 aaKnown RBP15.86■□□□□ 0.13
COL17A1-202ENST00000369733 DTLQ9NZJ0 730 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 KANSL3Q9P2N6 904 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 PEAK1Q9H792 1746 aa15.86■□□□□ 0.13
COL17A1-202ENST00000369733 SPATA31A6Q5VVP1 1343 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 TYROBPO43914 113 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 CFHP08603 1231 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 RAB25P57735 213 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms