RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 GLMNQ92990 594 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 NAT6Q93015 286 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 HES6Q96HZ4 224 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 MRGPRX2Q96LB1 330 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 NRSN2Q9GZP1 204 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 C10orf88Q9H8K7 445 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 TRHDEQ9UKU6 1024 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 AMFRQ9UKV5 643 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 SUFUQ9UMX1 484 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 GPR34Q9UPC5 381 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 SPO11Q9Y5K1 396 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 CAPN6Q9Y6Q1 641 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 CELSR3Q9NYQ7 3312 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 CPED1A4D0V7 1026 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 FADS2P1A8MWK0 482 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 MIF4GDA9UHW6 222 aaKnown RBP20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 CASC3O15234 703 aaKnown RBP20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 PMPCBO75439 489 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 WNT3AP56704 352 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 DCDC1P59894 354 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 KLF1Q13351 362 aaPredicted RBP20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 PCSK7Q16549 785 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 PEX26Q7Z412 305 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 KDELC2Q7Z4H8 507 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 SFTPA2Q8IWL1 248 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 SYCE1Q8N0S2 351 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 HIC2Q96JB3 615 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 FAM83DQ9H4H8 585 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 CCDC86Q9H6F5 360 aaKnown RBP20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 CARS2Q9HA77 564 aaKnown RBP20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 ZFYVE1Q9HBF4 777 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 UBP1Q9NZI7 540 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 PKD2L2Q9NZM6 624 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 ZNF711Q9Y462 761 aa20.42■□□□□ 0.86
SMNDC1-201ENST00000369592 LAMA5O15230 3695 aa20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 NTN3O00634 580 aaPredicted RBP20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 PIRTP0C851 137 aa20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 TCEA2Q15560 299 aa20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 PID1Q7Z2X4 250 aa20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 KLHDC8BQ8IXV7 354 aa20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 GPR26Q8NDV2 337 aa20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 MAPK15Q8TD08 544 aa20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 CCHCR1Q8TD31 782 aa20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 CDH19Q9H159 772 aa20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 SPATS2LQ9NUQ6 558 aaKnown RBP20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 KLHL8Q9P2G9 620 aaPredicted RBP20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 RABGEF1Q9UJ41 708 aa20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 PACSIN2Q9UNF0 486 aaPredicted RBP20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 DOLKQ9UPQ8 538 aa20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 PCYT1BQ9Y5K3 369 aaPredicted RBP20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 OAS3Q9Y6K5 1087 aaKnown RBP20.41■□□□□ 0.86
SMNDC1-201ENST00000369592 SETXQ7Z333 2677 aaKnown RBP20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 AURKAO14965 403 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 DNAJC6O75061 913 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 TJP3O95049 919 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 FTCDO95954 541 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 RBP3P10745 1247 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 ADCY8P40145 1251 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 CYP4F3Q08477 520 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 PYCR3Q53H96 274 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 ZNF662Q6ZS27 426 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 TAF8Q7Z7C8 310 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 TRIM74Q86UV6 250 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 TTC30BQ8N4P2 665 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 SRPK1Q96SB4 655 aaKnown RBP20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 GBA3Q9H227 469 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 SIRPGQ9P1W8 387 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 VPS18Q9P253 973 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 SHOC2Q9UQ13 582 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 TMEM98Q9Y2Y6 226 aa20.4■□□□□ 0.86
SMNDC1-201ENST00000369592 GOLGA6CA6NDK9 693 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 GOLGA6BA6NDN3 693 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 H7C0C1 242 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 ARHGAP6O43182 974 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 FGF1P05230 155 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 GOLGA6DP0CG33 693 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 GNPDA1P46926 289 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 ATP5OP48047 213 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 EIF3EP60228 445 aaKnown RBP20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 CTBSQ01459 385 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 MPP3Q13368 585 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 HLTFQ14527 1009 aaKnown RBP eCLIP20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 SIRPB2Q5JXA9 342 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 CERCAMQ5T4B2 595 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 FAM46DQ8NEK8 389 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 OR6C4Q8NGE1 309 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 UBE2Q2Q8WVN8 375 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 CCDC3Q9BQI4 270 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 GOLGA6AQ9NYA3 693 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 GULP1Q9UBP9 304 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 APPL1Q9UKG1 709 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 PCDHB1Q9Y5F3 818 aa20.39■□□□□ 0.85
SMNDC1-201ENST00000369592 GOLGA6L6A8MZA4 724 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 TCEA3O75764 348 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 ZIC2O95409 532 aaPredicted RBP20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 PNLIPP16233 465 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 BPIP17213 487 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 ADRA1AP35348 466 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 HMGCLP35914 325 aa20.38■□□□□ 0.85
SMNDC1-201ENST00000369592 CHRNA4P43681 627 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms