RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 RUVBL2Q9Y230 463 aaKnown RBP16.73■□□□□ 0.27
PHGDH-202ENST00000369409 VPS9D1Q9Y2B5 631 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 LRRK1Q38SD2 2015 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 GOLGA8CPA6NN73 597 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 KPNA3O00505 521 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-202ENST00000369409 PFDN6O15212 129 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 OR1I1O60431 355 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 SNX3O60493 162 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 KLHL2O95198 593 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 ITGALP20701 1170 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 DMTNQ08495 405 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 CSHL1Q14406 222 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 DBN1Q16643 649 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 C9orf64Q5T6V5 341 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 PARS2Q7L3T8 475 aaKnown RBP16.73■□□□□ 0.27
PHGDH-202ENST00000369409 OTOAQ7RTW8 1153 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 C10orf107Q8IVU9 208 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 TMEM245Q9H330 911 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 ASB8Q9H765 288 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 PCDH12Q9NPG4 1184 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 CPSF2Q9P2I0 782 aaKnown RBP16.73■□□□□ 0.27
PHGDH-202ENST00000369409 C16orf96A6NNT2 1141 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 KLF11O14901 512 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 APODP05090 189 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 CYP2A6P11509 494 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-202ENST00000369409 CPA3P15088 417 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 TIMP2P16035 220 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 XPAP23025 273 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-202ENST00000369409 VIPR1P32241 457 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 IL12RB1P42701 662 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 TIAL1Q01085 375 aaKnown RBP eCLIP16.72■□□□□ 0.27
PHGDH-202ENST00000369409 PTSQ03393 145 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 BST1Q10588 318 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 NFATC2Q13469 925 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 ARHGEF7Q14155 803 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 TSNAXIP1Q2TAA8 658 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 CES4AQ5XG92 561 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 EGFLAMQ63HQ2 1017 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 SPATA21Q7Z572 469 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 SNX20Q7Z614 316 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 FSTL5Q8N475 847 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-202ENST00000369409 GPR26Q8NDV2 337 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 PPP1R14CQ8TAE6 165 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 HEXDCQ8WVB3 486 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 OR8D1Q8WZ84 308 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 GPR78Q96P69 363 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 IGSF5Q9NSI5 407 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 XPR1Q9UBH6 696 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 DKK3Q9UBP4 350 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 SARDHQ9UL12 918 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 HCN2Q9UL51 889 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 CKAP5Q14008 2032 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 PIKFYVEQ9Y2I7 2098 aa16.72■□□□□ 0.27
PHGDH-202ENST00000369409 RHOBTB1O94844 696 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 WISP3O95389 354 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 PRNPP04156 253 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 APOA4P06727 396 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 CCDC166P0CW27 439 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 FGF3P11487 239 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 CA5AP35218 305 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 GRIA2P42262 883 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 METAP1P53582 386 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 ELAVL3Q14576 367 aaKnown RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 CHRNA6Q15825 494 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 ATG16L1Q676U5 607 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 TMEM207Q6UWW9 146 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 RFLNAQ6ZTI6 216 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 SERPINA9Q86WD7 417 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 CBARPQ8N350 705 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 CCDC197Q8NCU1 140 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 RAB3IL1Q8TBN0 382 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 ANKRD49Q8WVL7 239 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 ERLEC1Q96DZ1 483 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 THOC1Q96FV9 657 aaKnown RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 BIRC8Q96P09 236 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 ACOX2Q99424 681 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 CACNA2D2Q9NY47 1150 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 THAP10Q9P2Z0 257 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 STARD13Q9Y3M8 1113 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 ATG2BQ96BY7 2078 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 A0A1W2PPC1 479 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 ANHXE9PGG2 379 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 G3V2L1 256 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 EBAG9O00559 213 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 LTA4HP09960 611 aaKnown RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 ZNF30P17039 623 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 SUOXP51687 545 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 KPNA2P52292 529 aaKnown RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 PDAP1Q13442 181 aaKnown RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 AAK1Q2M2I8 961 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 PREPLQ4J6C6 727 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 CTSL3PQ5NE16 218 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 TTC7BQ86TV6 843 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 PIP4K2CQ8TBX8 421 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 CSGALNACT1Q8TDX6 532 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 GRAMD1AQ96CP6 724 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 CCDC97Q96F63 343 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 FBRSL1Q9HCM7 1045 aaKnown RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 CRLS1Q9UJA2 301 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 MID2Q9UJV3 735 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms