RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 NEPROQ6NW34 567 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 C8orf82Q6P1X6 216 aaPredicted RBP14.69□□□□□ -0.06
PRKN-204ENST00000366896 C16orf59Q7L2K0 433 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 MFSD2AQ8NA29 543 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 SCAMP5Q8TAC9 235 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 FAM45AQ8TCE6 357 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 PLEKHA8Q96JA3 519 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 OLFM1Q99784 485 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 ACBD6Q9BR61 282 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 NPLQ9BXD5 320 aaPredicted RBP14.69□□□□□ -0.06
PRKN-204ENST00000366896 TMLHEQ9NVH6 421 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 OSER1Q9NX31 292 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 H3BMQ9 156 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 MSI1O43347 362 aaKnown RBP14.68□□□□□ -0.06
PRKN-204ENST00000366896 CLASP2O75122 1294 aaKnown RBP14.68□□□□□ -0.06
PRKN-204ENST00000366896 PAX3P23760 479 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 PGFP49763 221 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 GATMP50440 423 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 PLK1P53350 603 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 FPGSQ05932 587 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 PPIGQ13427 754 aaKnown RBP eCLIP14.68□□□□□ -0.06
PRKN-204ENST00000366896 ACAP2Q15057 778 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 TTC33Q6PID6 262 aaPredicted RBP14.68□□□□□ -0.06
PRKN-204ENST00000366896 CYP2R1Q6VVX0 501 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 CPNE9Q8IYJ1 553 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 ZNF786Q8N393 782 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 PACRGLQ8N7B6 248 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 MRGPRX2Q96LB1 330 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 UBXN10Q96LJ8 280 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 COG8Q96MW5 612 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 SLC25A23Q9BV35 468 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 CXorf21Q9HAI6 301 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 SPAG4Q9NPE6 437 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 TRIM64BA6NI03 449 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 WASH4PA8MWX3 477 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 FBP2O00757 339 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 DLGAP1O14490 977 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 ALDH2P05091 517 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 GNAO1P09471 354 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 LTA4HP09960 611 aaKnown RBP14.68□□□□□ -0.06
PRKN-204ENST00000366896 SYN1P17600 705 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 FUT4P22083 530 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 DCKP27707 260 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 C21orf59P57076 290 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 MTA1Q13330 715 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 PCSK7Q16549 785 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 TIGD5Q53EQ6 642 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 BTBD8Q5XKL5 378 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 REP15Q6BDI9 236 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 DDHD1Q8NEL9 900 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 PPWD1Q96BP3 646 aaKnown RBP14.68□□□□□ -0.06
PRKN-204ENST00000366896 CASD1Q96PB1 797 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 TCF12Q99081 682 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 FSD1LQ9BXM9 530 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 TRPC7Q9HCX4 862 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 ATP13A1Q9HD20 1204 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 ARMC1Q9NVT9 282 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 SMOXQ9NWM0 555 aa14.68□□□□□ -0.06
PRKN-204ENST00000366896 NYNRINQ9P2P1 1898 aaKnown RBP14.68□□□□□ -0.06
PRKN-204ENST00000366896 SOBPA7XYQ1 873 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 A8MT66 165 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 GIPC1O14908 333 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 UBDO15205 165 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 HOXA2O43364 376 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 EFCAB14O75071 495 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 PAGE1O75459 146 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 TIPRLO75663 272 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 WISP3O95389 354 aaPredicted RBP14.67□□□□□ -0.06
PRKN-204ENST00000366896 CYP11A1P05108 521 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 OCM2P0CE71 109 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 OCMP0CE72 109 aaPredicted RBP14.67□□□□□ -0.06
PRKN-204ENST00000366896 TTKP33981 857 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 BCAP31P51572 246 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 NME5P56597 212 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 TUSC3Q13454 348 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 ERMP1Q7Z2K6 904 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 TMEM209Q96SK2 561 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 RBM22Q9NW64 420 aaKnown RBP eCLIP14.67□□□□□ -0.06
PRKN-204ENST00000366896 SELENONQ9NZV5 590 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 SFMBT1Q9UHJ3 866 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 MTF2Q9Y483 593 aaPredicted RBP14.67□□□□□ -0.06
PRKN-204ENST00000366896 BAIAP3O94812 1187 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 WDR5P61964 334 aaKnown RBP14.67□□□□□ -0.06
PRKN-204ENST00000366896 NFKB2Q00653 900 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 FASTKQ14296 549 aaKnown RBP14.67□□□□□ -0.06
PRKN-204ENST00000366896 SAMD4BQ5PRF9 694 aaKnown RBP14.67□□□□□ -0.06
PRKN-204ENST00000366896 INTS11Q5TA45 600 aaKnown RBP14.67□□□□□ -0.06
PRKN-204ENST00000366896 NANOGP8Q6NSW7 305 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 CUZD1Q86UP6 607 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 ABI1Q8IZP0 508 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 PKMYT1Q99640 499 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 SLC25A51Q9H1U9 297 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 ABCC13Q9NSE7 274 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 TMEM181Q9P2C4 612 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 DOLKQ9UPQ8 538 aa14.67□□□□□ -0.06
PRKN-204ENST00000366896 B4GALT3O60512 393 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 ZBTB11O95625 1053 aaPredicted RBP14.66□□□□□ -0.06
PRKN-204ENST00000366896 MT-CO1P00395 513 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 SNRPB2P08579 225 aaKnown RBP14.66□□□□□ -0.06
PRKN-204ENST00000366896 CCR1P32246 355 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms