RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 CNTN3Q9P232 1028 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 ALDH2P05091 517 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 GALK1P51570 392 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 NDST2P52849 883 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 LRRC15Q8TF66 581 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZBTB26Q9HCK0 441 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 FZD10Q9ULW2 581 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 WBP11Q9Y2W2 641 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 SPAG17Q6Q759 2223 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 ASLP04424 464 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 SDE2Q6IQ49 451 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 TAF4O00268 1085 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 ITGAXP20702 1163 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 PAICSP22234 425 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 MAPKAPK2P49137 400 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 RPL38P63173 70 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 PHC3Q8NDX5 983 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 TSPEARQ8WU66 669 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 MRM3Q9HC36 420 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 AASDHPPTQ9NRN7 309 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 MOSPD1Q9UJG1 213 aa11.77□□□□□ -0.53
CDC42BPA-202ENST00000366764 ADAMTS3O15072 1205 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 WARSP23381 471 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 KRT78Q8N1N4 520 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 ARRDC4Q8NCT1 418 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 LINGO1Q96FE5 620 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC9A8Q9Y2E8 581 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 SMCHD1A6NHR9 2005 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 PDHXO00330 501 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 EEFSECP57772 596 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 IRF8Q02556 426 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 HNRNPDQ14103 355 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 CCDC185Q8N715 623 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 ARL10Q8N8L6 244 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 FAM84AQ96KN4 292 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 KCNU1A8MYU2 1149 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 PAN2Q504Q3 1202 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 PSMA8Q8TAA3 256 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC38A2Q96QD8 506 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 SPON1Q9HCB6 807 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 ELOVL7A1L3X0 281 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 SNRPD1P62314 119 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 HECTD3Q5T447 861 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 NODALQ96S42 347 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 GIN1Q9NXP7 522 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 ADGRE2Q9UHX3 823 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 OR6C75A6NL08 312 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 CLDN11O75508 207 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 DNAJB5O75953 348 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 RALGDSQ12967 914 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 RBM48Q5RL73 367 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 FAM171A1Q5VUB5 890 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZNF516Q92618 1163 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 TEFMQ96QE5 360 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 PDE10AQ9Y233 779 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 SMIM28A0A1B0GU29 152 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 IDH3BO43837 385 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 KIR3DL1P43629 444 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 USP46P62068 366 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 CDK20Q8IZL9 346 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 PEX16Q9Y5Y5 336 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 TOGARAM1Q9Y4F4 1720 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 ATP6AP2A0A1C7CYW4 349 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 ATP6AP2O75787 350 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 GPX6P59796 221 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 ALDH6A1Q02252 535 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 FSTL5Q8N475 847 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 NXNL1Q96CM4 212 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 CLTBP09497 229 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 VWA5B1Q5TIE3 1220 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 MFSD3Q96ES6 412 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 EURLQ9NYK6 297 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 EGFL7Q9UHF1 273 aa11.76□□□□□ -0.53
CDC42BPA-202ENST00000366764 RAP2AP10114 183 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 IL1R2P27930 398 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 THOP1P52888 689 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 COLGALT2Q8IYK4 626 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 TIMM13Q9Y5L4 95 aaPredicted RBP11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 FAM234BA2RU67 622 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 RFXANKO14593 260 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC6A2P23975 617 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 NOVP48745 357 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 BOP1Q14137 746 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 GPR22Q99680 433 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 B3GNT5Q9BYG0 378 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 AGO1Q9UL18 857 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 IGFBP5P24593 272 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 RDH12Q96NR8 316 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 ABCB10Q9NRK6 738 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZIM2Q9NZV7 527 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 FBXW11Q9UKB1 542 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 CLCA2Q9UQC9 943 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 TSPAN1O60635 241 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 SERPINB7O75635 380 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 FTH1P02794 183 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 DENND5AQ6IQ26 1287 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 CHCHD4Q8N4Q1 142 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 DENND1AQ8TEH3 1009 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 GPR88Q9GZN0 384 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms