RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ZNF449Q6P9G9 518 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 TAOK1Q7L7X3 1001 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 CCDC117Q8IWD4 279 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 PLPP6Q8IY26 295 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 CNPY4Q8N129 248 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 HJURPQ8NCD3 748 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 GSDMBQ8TAX9 411 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 SAP25Q8TEE9 199 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 STAMBPL1Q96FJ0 436 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 OXNAD1Q96HP4 312 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 ZNF578Q96N58 590 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 ELF4Q99607 663 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 FAM117AQ9C073 453 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 CNOT10Q9H9A5 744 aaKnown RBP11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 EBF2Q9HAK2 575 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 PDFQ9HBH1 243 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 HAUS2Q9NVX0 235 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 BFARQ9NZS9 450 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 TTLL3Q9Y4R7 772 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 ACTL7BQ9Y614 415 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 MAD1L1Q9Y6D9 718 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 CREBBPQ92793 2442 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 RELNP78509 3460 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 MAGEB16A2A368 324 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 TYW5A2RUC4 315 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 POC1B-GALNT4F8VUJ3 575 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 WNT9AO14904 365 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 KLK10O43240 276 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 PENKP01210 267 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 C1QAP02745 245 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 WNT1P04628 370 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 EPHX1P07099 455 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 RHOCP08134 193 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 C7P10643 843 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 PGAM1P18669 254 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 MGAT1P26572 445 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 HOXD9P28356 352 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 ADRA1AP35348 466 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 SGSHP51688 502 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 RACK1P63244 317 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 INSM1Q01101 510 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 SLC10A7Q0GE19 358 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 MTM1Q13496 603 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 FRG1Q14331 258 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 SPARCL1Q14515 664 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 LBRQ14739 615 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 TERF2Q15554 542 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 MPP7Q5T2T1 576 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 FYB2Q5VWT5 728 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 CXorf57Q6NSI4 855 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 ADGRD1Q6QNK2 874 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 UNC5AQ6ZN44 842 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 CAPN12Q6ZSI9 719 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 EXOC3L1Q86VI1 746 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 ZNF354CQ86Y25 554 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 BBS5Q8N3I7 341 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 MPP5Q8N3R9 675 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 ZNF366Q8N895 744 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 OR52K1Q8NGK4 314 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 KCNE4Q8WWG9 221 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 TADA1Q96BN2 335 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 TMA16Q96EY4 203 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 IMP4Q96G21 291 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 CFAP36Q96G28 342 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 PLAC1Q9HBJ0 212 aa11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 PSMC3IPQ9P2W1 217 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 HEMK1Q9Y5R4 338 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-202ENST00000366216 A0A0D9SEW6 157 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 C2orf72A6NCS6 295 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 FAM159BA6NKW6 160 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 C10orf142B7Z368 130 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 YKT6O15498 198 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 TBL1XO60907 577 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 LUC7L3O95232 432 aaKnown RBP11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 CKMT2P17540 419 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 MLLT3P42568 568 aaPredicted RBP11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 MSH2P43246 934 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 OXCT1P55809 520 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 SESN2P58004 480 aaPredicted RBP11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 CDH17Q12864 832 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 CAMK2GQ13555 558 aaPredicted RBP11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 SLC14A2Q15849 920 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 MPPE1Q53F39 396 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 SPANXN3Q5MJ09 141 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 ALG1LQ6GMV1 187 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 KDELC1Q6UW63 502 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 SERPINA13PQ6UXR4 307 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 DNAAF3Q8N9W5 541 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 OR7D4Q8NG98 312 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 OR52K2Q8NGK3 314 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 OR2T3Q8NH03 318 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 SPATA22Q8NHS9 363 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 SLC44A1Q8WWI5 657 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 TTC17Q96AE7 1141 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 PAFAH2Q99487 392 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 TBL1YQ9BQ87 522 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 DPH1Q9BZG8 443 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 IL22Q9GZX6 179 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 BTBD1Q9H0C5 482 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 CAAP1Q9H8G2 361 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms