RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 B4DGG1 531 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 FIBPO43427 364 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 ZIC3O60481 467 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 ZC3H11AO75152 810 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 WISP2O76076 250 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 BEST1O76090 585 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 TPPPO94811 219 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 OAZ2O95190 189 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 CENPBP07199 599 aaPredicted RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 G6PDP11413 515 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 CD58P19256 250 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 UGT1A1P22309 533 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 SLC15A1P46059 708 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 GPR143P51810 404 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 NUDT6P53370 316 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 GALCP54803 685 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 HNRNPH2P55795 449 aaKnown RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 MRPS5P82675 430 aaKnown RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 SORDQ00796 357 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 SREBF2Q12772 1141 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 CHAF1BQ13112 559 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 MYLK3Q32MK0 819 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 DNTTIP2Q5QJE6 756 aaKnown RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 FNBP1LQ5T0N5 605 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 NSUN5P2Q63ZY6 315 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 FRG2Q64ET8 278 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 METTL2BQ6P1Q9 378 aaKnown RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 TMEM154Q6P9G4 183 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 C9orf47Q6ZRZ4 202 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 Q6ZTK2 550 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 ADIPOR2Q86V24 386 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 KBTBD6Q86V97 674 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 RBMXL3Q8N7X1 1067 aaKnown RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 CCDC89Q8N998 374 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 SLC38A9Q8NBW4 561 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 ZNF114Q8NC26 417 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 WFIKKN2Q8TEU8 576 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 ASB5Q8WWX0 329 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 RND1Q92730 232 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 METTL2AQ96IZ6 378 aaKnown RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 FEM1CQ96JP0 617 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 LRFN5Q96NI6 719 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 SH3GL2Q99962 352 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 NUDT16L1Q9BRJ7 211 aaKnown RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 DCLK3Q9C098 648 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 FTOQ9C0B1 505 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 FAM234AQ9H0X4 552 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 TMX4Q9H1E5 349 aaPredicted RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 PIGMQ9H3S5 423 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 NOX4Q9NPH5 578 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 ACSS1Q9NUB1 689 aaPredicted RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 CWC15Q9P013 229 aaKnown RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 COPG2Q9UBF2 871 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 UBA2Q9UBT2 640 aaPredicted RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 FBXW11Q9UKB1 542 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 PCDHA7Q9UN72 937 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 CDC14AQ9UNH5 594 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 ERVK-11Q9UQG0 969 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 CMAHPQ9Y471 501 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 TTLL3Q9Y4R7 772 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 INSL5Q9Y5Q6 135 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 MAU2Q9Y6X3 613 aa2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 ASTN2O75129 1339 aaPredicted RBP2.4□□□□□ -2.03
RNU4-56P-201ENST00000364700 RPS10-NUDT3A0A1W2PQS6 291 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 KDM4EB2RXH2 506 aaPredicted RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 FAM90A26D6RGX4 464 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 M0QZ24 198 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 VWA5AO00534 786 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 SMAD9O15198 467 aaKnown RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 OGG1O15527 345 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 HS6ST1O60243 411 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 CREG1O75629 220 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 TOMM70O94826 608 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 CYP1A2P05177 515 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 SRPRAP08240 638 aaKnown RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 CLTBP09497 229 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 IGHV4-30-4P0DP06 118 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 KRT10P13645 584 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 MMP9P14780 707 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 ANXA7P20073 488 aaKnown RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 SCP2P22307 547 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 UBA1P22314 1058 aaKnown RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 ITGB8P26012 769 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 HOXD3P31249 432 aaPredicted RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 HOXA11P31270 313 aaPredicted RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 EIF2DP41214 584 aaKnown RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 THBS3P49746 956 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 PGGT1BP53609 377 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 ECT2LQ008S8 904 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 PPATQ06203 517 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 ACSM2AQ08AH3 577 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 GOLGA8DPQ0D2H9 430 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 ILF3Q12906 894 aaKnown RBP eCLIP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 IKQ13123 557 aaPredicted RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 GRAPQ13588 217 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 BAATQ14032 418 aaPredicted RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 OASLQ15646 514 aaKnown RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 AMZ1Q400G9 498 aa2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 TDRD12Q587J7 1177 aaKnown RBP2.39□□□□□ -2.03
RNU4-56P-201ENST00000364700 ZNF805Q5CZA5 627 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms