RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 ARCN1P48444 511 aaKnown RBP19■□□□□ 0.63
CMTM3-201ENST00000361909 GSSP48637 474 aa19■□□□□ 0.63
CMTM3-201ENST00000361909 FAM189BP81408 668 aa19■□□□□ 0.63
CMTM3-201ENST00000361909 LINC00523Q86TU6 105 aa19■□□□□ 0.63
CMTM3-201ENST00000361909 CUZD1Q86UP6 607 aa19■□□□□ 0.63
CMTM3-201ENST00000361909 RDH12Q96NR8 316 aa19■□□□□ 0.63
CMTM3-201ENST00000361909 CEP41Q9BYV8 373 aa19■□□□□ 0.63
CMTM3-201ENST00000361909 RMND5AQ9H871 391 aa19■□□□□ 0.63
CMTM3-201ENST00000361909 AKIP1Q9NQ31 210 aa19■□□□□ 0.63
CMTM3-201ENST00000361909 MAGED2Q9UNF1 606 aaPredicted RBP19■□□□□ 0.63
CMTM3-201ENST00000361909 ERVK-11Q9UQG0 969 aa19■□□□□ 0.63
CMTM3-201ENST00000361909 VWA7Q9Y334 891 aa19■□□□□ 0.63
CMTM3-201ENST00000361909 ARPC2O15144 300 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 LDLRP01130 860 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 IDUAP35475 653 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 LEPRP48357 1165 aaKnown RBP18.99■□□□□ 0.63
CMTM3-201ENST00000361909 SCNN1GP51170 649 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 C1QTNF8P60827 252 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 SKIV2LQ15477 1246 aaKnown RBP18.99■□□□□ 0.63
CMTM3-201ENST00000361909 AASDHQ4L235 1098 aaPredicted RBP18.99■□□□□ 0.63
CMTM3-201ENST00000361909 INTS6LQ5JSJ4 861 aaKnown RBP18.99■□□□□ 0.63
CMTM3-201ENST00000361909 PTRH1Q86Y79 214 aaKnown RBP18.99■□□□□ 0.63
CMTM3-201ENST00000361909 SPPL2CQ8IUH8 684 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 SLC41A1Q8IVJ1 513 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 USP33Q8TEY7 942 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 NXNL1Q96CM4 212 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 TRIM54Q9BYV2 358 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 SFMBT1Q9UHJ3 866 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 FAM95CA0A1B0GW59 222 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 HPCAL1P37235 193 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 OPRL1P41146 370 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 AFF1P51825 1210 aaKnown RBP18.99■□□□□ 0.63
CMTM3-201ENST00000361909 ATXN1P54253 815 aaKnown RBP18.99■□□□□ 0.63
CMTM3-201ENST00000361909 XAF1Q6GPH4 301 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 LAYNQ6UX15 382 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 LARP4Q71RC2 724 aaKnown RBP eCLIP18.99■□□□□ 0.63
CMTM3-201ENST00000361909 RTN4RL1Q86UN2 441 aaPredicted RBP18.99■□□□□ 0.63
CMTM3-201ENST00000361909 ANKRD13BQ86YJ7 626 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 C12orf29Q8N999 325 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 PIK3C3Q8NEB9 887 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 TSPEARQ8WU66 669 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 BTN2A3PQ96KV6 586 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 ANKMY1Q9P2S6 941 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 ANAPC2Q9UJX6 822 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 NME7Q9Y5B8 376 aa18.99■□□□□ 0.63
CMTM3-201ENST00000361909 ANGPT2O15123 496 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 IPO13O94829 963 aaKnown RBP18.98■□□□□ 0.63
CMTM3-201ENST00000361909 COL6A1P12109 1028 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 HDCP19113 662 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 GPX3P22352 226 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 EEF1B2P24534 225 aaKnown RBP18.98■□□□□ 0.63
CMTM3-201ENST00000361909 MATKP42679 507 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 BST2Q10589 180 aaKnown RBP18.98■□□□□ 0.63
CMTM3-201ENST00000361909 UPP1Q16831 310 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 SLC25A52Q3SY17 297 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 CERCAMQ5T4B2 595 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 ACOT1Q86TX2 421 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 CADM3Q8N126 398 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 TMEM86AQ8N2M4 240 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 TNIP3Q96KP6 325 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 UROC1Q96N76 676 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 CRISPLD2Q9H0B8 497 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 HPS4Q9NQG7 708 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 CHRAC1Q9NRG0 131 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 TDRD15B5MCY1 1934 aaKnown RBP18.98■□□□□ 0.63
CMTM3-201ENST00000361909 FAM149AA5PLN7 773 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 DCLK1O15075 740 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 USP12O75317 370 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 GABBR2O75899 941 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 SAT1P21673 171 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 CLCNKBP51801 687 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 BCAT1P54687 386 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 AIF1P55008 147 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 POU4F1Q01851 419 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 PRPSAP1Q14558 356 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 FAM83EQ2M2I3 478 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 TECRLQ5HYJ1 363 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 CCDC117Q8IWD4 279 aaPredicted RBP18.98■□□□□ 0.63
CMTM3-201ENST00000361909 PYROXD2Q8N2H3 581 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 HDAC2Q92769 488 aaKnown RBP18.98■□□□□ 0.63
CMTM3-201ENST00000361909 UBXN10Q96LJ8 280 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 BDH2Q9BUT1 245 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 TRAF6Q9Y4K3 522 aa18.98■□□□□ 0.63
CMTM3-201ENST00000361909 FAM47E-STBD1D6RA91 191 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 GABRDO14764 452 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 JRKO75564 520 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 MATN4O95460 622 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 AHSGP02765 367 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 NMBRP28336 390 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 AVPR1AP37288 418 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 EPS8Q12929 822 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 ANKRD33Q7Z3H0 272 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 FUNDC1Q8IVP5 155 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 PTCD2Q8WV60 388 aaKnown RBP18.97■□□□□ 0.63
CMTM3-201ENST00000361909 B3GNT5Q9BYG0 378 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 LHPPQ9H008 270 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 ING2Q9H160 280 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 PARVBQ9HBI1 364 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 KLHL3Q9UH77 587 aa18.97■□□□□ 0.63
CMTM3-201ENST00000361909 ENPP5Q9UJA9 477 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms