RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TRPS1Q9UHF7 1281 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 GPN3Q9UHW5 284 aaPredicted RBP4.85□□□□□ -1.63
SCN3A-202ENST00000360093 CYP7B1O75881 506 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 NUDT14O95848 222 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 EPHX1P07099 455 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 CMPK1P30085 196 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 GNPDA1P46926 289 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 HNMTP50135 292 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 APLP1P51693 650 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 MRPS15P82914 257 aaKnown RBP4.85□□□□□ -1.63
SCN3A-202ENST00000360093 INCA1Q0VD86 236 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 C16orf72Q14CZ0 275 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 TSTD2Q5T7W7 516 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 GALNT18Q6P9A2 607 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 CLEC20AQ6ZU45 233 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 CELF5Q8N6W0 485 aaKnown RBP4.85□□□□□ -1.63
SCN3A-202ENST00000360093 DDHD1Q8NEL9 900 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 RIT1Q92963 219 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 AP2M1Q96CW1 435 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 KLHL5Q96PQ7 755 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 DNAJC28Q9NX36 388 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 ARMCX1Q9P291 453 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 GSTK1Q9Y2Q3 226 aa4.85□□□□□ -1.63
SCN3A-202ENST00000360093 CENPXA8MT69 81 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 H7C0S8 307 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 RGS5O15539 181 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 PEX1O43933 1283 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CDK14O94921 469 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 PRAMEF1O95521 474 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 IFNA16P05015 189 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 UGT2B4P06133 528 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 NR2F1P10589 423 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CCL5P13501 91 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 PRDX6P30041 224 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CDH5P33151 784 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 MAGEA11P43364 429 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 DGKGP49619 791 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 PSME3P61289 254 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 RPL38P63173 70 aaKnown RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SP2Q02086 613 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 BIKQ13323 160 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SEMA5AQ13591 1074 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 KIAA0930Q6ICG6 404 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 PEX5LQ8IYB4 626 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CDYL2Q8N8U2 506 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 PPP1R13LQ8WUF5 828 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 C7orf43Q8WVR3 580 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CEP295NLQ96MC4 621 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 FAM192AQ9GZU8 254 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 DPEP3Q9H4B8 488 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 PIF1Q9H611 641 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CPQQ9Y646 472 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 MYL12BO14950 172 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 PEX11AO75192 247 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SLC25A12O75746 678 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 RNASEH2AO75792 299 aaKnown RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CCNA2P20248 432 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 LMO2P25791 158 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 NR1D2Q14995 579 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CCDC157Q569K6 752 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 BRAT1Q6PJG6 821 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 C7orf61Q8IZ16 206 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 TTLQ8NG68 377 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 PPCDCQ96CD2 204 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 DEPDC7Q96QD5 511 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 OLFM1Q99784 485 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 MIR1-1HGQ9H1L0 117 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SMOC2Q9H3U7 446 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 NHSL1Q5SYE7 1610 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 GSAPA4D1B5 854 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 TRIM24O15164 1050 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 VIPP01282 170 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 OR4Q2P0C623 313 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SPATA31D3P0C874 917 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 NDUFS1P28331 727 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 RPIAP49247 311 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CDC42P60953 191 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 OASLQ15646 514 aaKnown RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SPATA31D4Q6ZUB0 917 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 DNAJB7Q7Z6W7 309 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CUZD1Q86UP6 607 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 C8orf59Q8N0T1 100 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 AHI1Q8N157 1196 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 BHLHE22Q8NFJ8 381 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SLC22A18Q96BI1 424 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 OR52E6Q96RD3 313 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SGK2Q9HBY8 427 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 ERVK-5Q9HDB9 667 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CLN6Q9NWW5 311 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 YJEFN3A6XGL0 299 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 AP3D1O14617 1153 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 EDF1O60869 148 aaKnown RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 ALPPL2P10696 532 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 BMP7P18075 431 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 GPM6BQ13491 265 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SF1Q15637 639 aaKnown RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 OTUD3Q5T2D3 398 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 TTC27Q6P3X3 843 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 ZNF783Q6ZMS7 281 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SNX20Q7Z614 316 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms