RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SPDYCQ5MJ68 293 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 HENMT1Q5T8I9 393 aaKnown RBP12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 CYS1Q717R9 158 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 SLC41A1Q8IVJ1 513 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 TP53I13Q8NBR0 393 aaPredicted RBP12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 DENND6BQ8NEG7 585 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 AP2M1Q96CW1 435 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 CFAP36Q96G28 342 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 ORAI3Q9BRQ5 295 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 RIOK2Q9BVS4 552 aaKnown RBP12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 C1QTNF7Q9BXJ2 289 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 SEMA4AQ9H3S1 761 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 SUDS3Q9H7L9 328 aaPredicted RBP12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 LRRC4CQ9HCJ2 640 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 MOCS1Q9NZB8 636 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 DMTF1Q9Y222 760 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 SSUH2Q9Y2M2 353 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 GLYATL1P3A0A0U1RQE8 302 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 A0A1W2PPC4 97 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 CCDC162PA2VCL2 907 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 AGAP14A8MT82 685 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 RAD51BO15315 384 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 SLC31A1O15431 190 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 VAPBO95292 243 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 LMNAP02545 664 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 PAMP19021 973 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 HNRNPA2B1P22626 353 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 SSTR1P30872 391 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 CHRNA6Q15825 494 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 EMBQ6PCB8 327 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 ZC3H14Q6PJT7 736 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 C3orf62Q6ZUJ4 267 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 LPCAT2Q7L5N7 544 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 TMEFF1Q8IYR6 380 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 TRAM1L1Q8N609 369 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 DEFB119Q8N690 84 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 FOXJ1Q92949 421 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 ZC3H10Q96K80 434 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 TTC25Q96NG3 672 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 AGAP2Q99490 1192 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 CDC42EP4Q9H3Q1 356 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 MBNL1Q9NR56 388 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 NINJ2Q9NZG7 142 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 PCDHGA2Q9Y5H1 932 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 HS3ST3A1Q9Y663 406 aa12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-201ENST00000359683 PRAMEF26H0Y7S4 382 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 SPAG6O75602 509 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 SRP72O76094 671 aaKnown RBP12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 SOD1P00441 154 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 GOT2P00505 430 aaKnown RBP12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 CD27P26842 260 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 TEAD1P28347 426 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 MC4RP32245 332 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 TRIM23P36406 574 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 PMS2P54278 862 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 PRAMEP78395 509 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 BRD3Q15059 726 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 LONRF1Q17RB8 773 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 PLK5Q496M5 336 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 ALS2CLQ60I27 953 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 PMS2CLQ68D20 193 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 PDPK2PQ6A1A2 396 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 PNCKQ6P2M8 343 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 AFTPHQ6ULP2 937 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 FAM151BQ6UXP7 276 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 TRMT10CQ7L0Y3 403 aaKnown RBP12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 PELI3Q8N2H9 469 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 TMEM145Q8NBT3 493 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 OR6P1Q8NGX9 317 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 OR4L1Q8NH43 312 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 GSDMBQ8TAX9 411 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 ZNF398Q8TD17 642 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 DNASE2BQ8WZ79 361 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 CAVIN3Q969G5 261 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 ZSCAN5AQ9BUG6 496 aa12.33□□□□□ -0.43
NIF3L1-201ENST00000359683 CEP192Q8TEP8 1941 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 PLXNA2O75051 1894 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 ZNF106Q9H2Y7 1883 aaKnown RBP12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 GON4LQ3T8J9 2241 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 EP300Q09472 2414 aaPredicted RBP12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 TRBV5-4A0A0C4DH59 114 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 FADS2P1A8MWK0 482 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 K7ESM1 405 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 PRAMEF1O95521 474 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 PYGLP06737 847 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 AKT2P31751 481 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 FOXN2P32314 431 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 CACNG1Q06432 222 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 IRF4Q15306 451 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 GPR33Q49SQ1 333 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 ATP13A5Q4VNC0 1218 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 ZNF449Q6P9G9 518 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 TRMT10BQ6PF06 316 aaKnown RBP12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 MICALCLQ6ZW33 695 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 SNX20Q7Z614 316 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 UNC5BQ8IZJ1 945 aa12.33□□□□□ -0.44
NIF3L1-201ENST00000359683 PLA2G15Q8NCC3 412 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms