RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 ARMC12Q5T9G4 340 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 AAGABQ6PD74 315 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 CHSY3Q70JA7 882 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 HTR3DQ70Z44 454 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 DEFB107AQ8IZN7 70 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 NKAPQ8N5F7 415 aaKnown RBP14.84□□□□□ -0.03
GABPB1-202ENST00000359031 SH3RF2Q8TEC5 729 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 ACDQ96AP0 544 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 GCNAQ96QF7 691 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 C19orf43Q9BQ61 176 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 ZBED2Q9BTP6 218 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 FCF1Q9Y324 198 aaKnown RBP14.84□□□□□ -0.03
GABPB1-202ENST00000359031 SH3BP1Q9Y3L3 701 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 ZNF711Q9Y462 761 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 MTF2Q9Y483 593 aaPredicted RBP14.84□□□□□ -0.03
GABPB1-202ENST00000359031 LRRC42Q9Y546 428 aa14.84□□□□□ -0.03
GABPB1-202ENST00000359031 COPG1Q9Y678 874 aaKnown RBP14.84□□□□□ -0.03
GABPB1-202ENST00000359031 TRAV19A0A0A6YYK7 116 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.83□□□□□ -0.04
GABPB1-202ENST00000359031 TRIM43BA6NCK2 446 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 TGM5O43548 720 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 SKAP2O75563 359 aaPredicted RBP14.83□□□□□ -0.04
GABPB1-202ENST00000359031 FGF18O76093 207 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 SUPT7LO94864 414 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 PGLSO95336 258 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 CKMP06732 381 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 CNPP09543 421 aaKnown RBP14.83□□□□□ -0.04
GABPB1-202ENST00000359031 PKMP14618 531 aaKnown RBP14.83□□□□□ -0.04
GABPB1-202ENST00000359031 KCNC1P48547 511 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 CSNK1DP48730 415 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 EPHB1P54762 984 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 ADARP55265 1226 aaKnown RBP14.83□□□□□ -0.04
GABPB1-202ENST00000359031 ZXDBP98169 803 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 CYP4F8P98187 520 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 SQLEQ14534 574 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 TAF11Q15544 211 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 MPPE1Q53F39 396 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 LRRC74BQ6ZQY2 392 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 STK40Q8N2I9 435 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 TMEM199Q8N511 208 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 PTGR2Q8N8N7 351 aaPredicted RBP14.83□□□□□ -0.04
GABPB1-202ENST00000359031 STAG3L4Q8TBR4 150 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 WFDC5Q8TCV5 224 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 TRIM43Q96BQ3 446 aaPredicted RBP14.83□□□□□ -0.04
GABPB1-202ENST00000359031 ZNF570Q96NI8 536 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 LRRC3Q9BY71 257 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 MAGEE1Q9HCI5 957 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 TMCO1Q9UM00 188 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 MED16Q9Y2X0 877 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 PKP3Q9Y446 797 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 TRAF6Q9Y4K3 522 aa14.83□□□□□ -0.04
GABPB1-202ENST00000359031 BPTFQ12830 3046 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 TMEM265A0A087WTH1 108 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 CXorf51AA0A1B0GTR3 108 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 SYCE1LA8MT33 242 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 H3BMM5 538 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 UBXN8O00124 270 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 SCAMP3O14828 347 aaKnown RBP14.82□□□□□ -0.04
GABPB1-202ENST00000359031 SOCS5O75159 536 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 TBX10O75333 385 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 RAG1P15918 1043 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 ITGB8P26012 769 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 NUDT2P50583 147 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 MTTPP55157 894 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 PEX6Q13608 980 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 MAPRE2Q15555 327 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 PTPRNQ16849 979 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 SETMARQ53H47 684 aaPredicted RBP14.82□□□□□ -0.04
GABPB1-202ENST00000359031 ZRANB3Q5FWF4 1079 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 TJAP1Q5JTD0 557 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 TMEM198Q66K66 360 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 PSAPL1Q6NUJ1 521 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 PAQR3Q6TCH7 311 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 GAREM2Q75VX8 874 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 SPNS2Q8IVW8 549 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 ELMOD1Q8N336 334 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 FBXW8Q8N3Y1 598 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 RYBPQ8N488 228 aaPredicted RBP14.82□□□□□ -0.04
GABPB1-202ENST00000359031 KYQ8NBH2 561 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 GIMAP7Q8NHV1 300 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 DDI1Q8WTU0 396 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 EXT2Q93063 718 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.82□□□□□ -0.04
GABPB1-202ENST00000359031 SERPINI1Q99574 410 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 CFAP97Q9P2B7 532 aa14.82□□□□□ -0.04
GABPB1-202ENST00000359031 TRMT6Q9UJA5 497 aaKnown RBP14.82□□□□□ -0.04
GABPB1-202ENST00000359031 NVLO15381 856 aaKnown RBP14.81□□□□□ -0.04
GABPB1-202ENST00000359031 ESR1P03372 595 aa14.81□□□□□ -0.04
GABPB1-202ENST00000359031 ADH1AP07327 375 aa14.81□□□□□ -0.04
GABPB1-202ENST00000359031 MTHFD2P13995 350 aa14.81□□□□□ -0.04
GABPB1-202ENST00000359031 CA8P35219 290 aa14.81□□□□□ -0.04
GABPB1-202ENST00000359031 PTGER3P43115 390 aa14.81□□□□□ -0.04
GABPB1-202ENST00000359031 ATP4BP51164 291 aa14.81□□□□□ -0.04
GABPB1-202ENST00000359031 SESN3P58005 492 aa14.81□□□□□ -0.04
GABPB1-202ENST00000359031 CACNG1Q06432 222 aa14.81□□□□□ -0.04
GABPB1-202ENST00000359031 PPM1LQ5SGD2 360 aa14.81□□□□□ -0.04
GABPB1-202ENST00000359031 ATXN7L2Q5T6C5 722 aaPredicted RBP14.81□□□□□ -0.04
GABPB1-202ENST00000359031 PIANPQ8IYJ0 282 aa14.81□□□□□ -0.04
GABPB1-202ENST00000359031 MAB21L3Q8N8X9 362 aa14.81□□□□□ -0.04
GABPB1-202ENST00000359031 KCNJ9Q92806 393 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms