RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 TRIM17Q9Y577 477 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 CCDC162PA2VCL2 907 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 CKMT2P17540 419 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 RPL17P18621 184 aaKnown RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 CLK1P49759 484 aaKnown RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 ARPC4P59998 168 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 MZB1Q8WU39 189 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 OSCP1Q8WVF1 389 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 PPM1MQ96MI6 270 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 PNMA8BQ9ULN7 279 aaPredicted RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 ZNF232Q9UNY5 417 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 E7ENX8 843 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 SLC7A4O43246 635 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 CDH3P22223 829 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 ACVRL1P37023 503 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 CCL23P55773 120 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 RPS24P62847 133 aaKnown RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 RPL38P63173 70 aaKnown RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 BCL2L1Q07817 233 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 HSPA14Q0VDF9 509 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 PRKG2Q13237 762 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 TBC1D25Q3MII6 688 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 PKDCCQ504Y2 493 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 C6orf183Q5T699 404 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 FAM151BQ6UXP7 276 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 DDX53Q86TM3 631 aaKnown RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 KHSRPQ92945 711 aaKnown RBP eCLIP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 OPTCQ9UBM4 332 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 CIDEBQ9UHD4 219 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 MOSPD1Q9UJG1 213 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 ARIH1Q9Y4X5 557 aaPredicted RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 SRCAPQ6ZRS2 3230 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 ZCWPW2A0A1B0GU75 182 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 SLC35E2BP0CK96 405 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 CD68P34810 354 aaPredicted RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 NR1H2P55055 460 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 SMAD3P84022 425 aaKnown RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 ADGRE1Q14246 886 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 CEP97Q8IW35 865 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 STYXQ8WUJ0 223 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 PPP1R14BQ96C90 147 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 COMMD8Q9NX08 183 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 LEF1Q9UJU2 399 aaPredicted RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 HOXA2O43364 376 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 VPS4BO75351 444 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 TRMUO75648 421 aaKnown RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 ALDH1A2O94788 518 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 CPSF4O95639 269 aaKnown RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 ALDH1A1P00352 501 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 URODP06132 367 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 NRG1Q02297 640 aaPredicted RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 CLCQ05315 142 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 LPIN1Q14693 890 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 MYBPC3Q14896 1274 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 PARP15Q460N3 678 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 IL23RQ5VWK5 629 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 MAMDC4Q6UXC1 1216 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 RALGPS2Q86X27 583 aaPredicted RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 ZCCHC7Q8N3Z6 543 aaKnown RBP12.22□□□□□ -0.45
COL20A1-201ENST00000358894 HSPBAP1Q96EW2 488 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 TCF12Q99081 682 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 DNAJB4Q9UDY4 337 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 EMCNQ9ULC0 261 aa12.22□□□□□ -0.45
COL20A1-201ENST00000358894 SBF2Q86WG5 1849 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 A0A0U1RQF3 1178 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 PTGES3LE9PB15 166 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 H3BMM5 538 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 TBL1XO60907 577 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 MLYCDO95822 493 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 PKMP14618 531 aaKnown RBP12.21□□□□□ -0.45
COL20A1-201ENST00000358894 ADSLP30566 484 aaPredicted RBP12.21□□□□□ -0.45
COL20A1-201ENST00000358894 ATP6V0D1P61421 351 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 GNA12Q03113 381 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 CYS1Q717R9 158 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 LRRC8DQ7L1W4 858 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 HORMAD1Q86X24 394 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 VPS33AQ96AX1 596 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 CDK5RAP1Q96SZ6 601 aaKnown RBP12.21□□□□□ -0.45
COL20A1-201ENST00000358894 COQ10BQ9H8M1 238 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 ARL15Q9NXU5 204 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 A0A087WXM4 84 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 OR6B1O95007 311 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 KRT6AP02538 564 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 LRG1P02750 347 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 KRT6BP04259 564 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 IDO1P14902 403 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 SERPINB10P48595 397 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 KRT6CP48668 564 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 POLD2P49005 469 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 YBEYP58557 167 aaPredicted RBP12.21□□□□□ -0.45
COL20A1-201ENST00000358894 LRRC74AQ0VAA2 488 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 CPSF6Q16630 551 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL20A1-201ENST00000358894 PPP1R3AQ16821 1122 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 ALFQ53S48 1182 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 GPR107Q5VW38 600 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 NCCRP1Q6ZVX7 275 aaPredicted RBP12.21□□□□□ -0.45
COL20A1-201ENST00000358894 ANKLE1Q8NAG6 615 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 OR10T2Q8NGX3 314 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 SPPL2BQ8TCT7 592 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 NRG4Q8WWG1 115 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms