RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 DUSP9Q99956 384 aaKnown RBP11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC39A8Q9C0K1 460 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 A0A087X0B3 334 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC28A1O00337 649 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 NKRFO15226 690 aaKnown RBP eCLIP11.48□□□□□ -0.575e-8■■□□□ 14.3
SPTBN1-202ENST00000356805 PRKD3O94806 890 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 APOC1P02654 83 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 YES1P07947 543 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 HGFP14210 728 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 CTNNB1P35222 781 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 PPM1AP35813 382 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 TRIM40Q6P9F5 258 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 PRELID2Q8N945 189 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 OR52K1Q8NGK4 314 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 HTRA1Q92743 480 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 MRPL9Q9BYD2 267 aaKnown RBP11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 POPDC2Q9HBU9 364 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 XPR1Q9UBH6 696 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 USP20Q9Y2K6 914 aa11.48□□□□□ -0.57
SPTBN1-202ENST00000356805 GRIA4P48058 902 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 EIF5AP63241 154 aaKnown RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 GSTCDQ8NEC7 633 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 C2orf49Q9BVC5 232 aaPredicted RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 IFT46Q9NQC8 304 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.47□□□□□ -0.572e-8■■■■□ 20.5
SPTBN1-202ENST00000356805 IKZF2Q9UKS7 526 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 PTX3P26022 381 aaPredicted RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 CLCN5P51795 746 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 RPL19P84098 196 aaKnown RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 PPATQ06203 517 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 LYPLAL1Q5VWZ2 237 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 ARMC10Q8N2F6 343 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 FITM2Q8N6M3 262 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 RASGEF1AQ8N9B8 481 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 CD101Q93033 1021 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SERPINB7O75635 380 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 MMP14P50281 582 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC26A2P50443 739 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 CYP4F8P98187 520 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 IKBKEQ14164 716 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SVOPLQ8N434 492 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 VANGL1Q8TAA9 524 aaPredicted RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 COPS4Q9BT78 406 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 ACE2Q9BYF1 805 aaPredicted RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 GRIP1Q9Y3R0 1128 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 ZCCHC11Q5TAX3 1644 aaKnown RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SLIT1O75093 1534 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 A0A0A0MRY4 1105 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 CAPN8A6NHC0 703 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 TMEM126BQ8IUX1 230 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 UBR7Q8N806 425 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SPATA13Q96N96 652 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 BRINP2Q9C0B6 783 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 GULP1Q9UBP9 304 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 DNM1LO00429 736 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 LIASO43766 372 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 PENKP01210 267 aaPredicted RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 PRH1P02810 166 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 MASP1P48740 699 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 TTPAP49638 278 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 NAGLUP54802 743 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 NIPAL1Q6NVV3 410 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 CHRDL2Q6WN34 429 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SATL1Q86VE3 508 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 TXNRD3Q86VQ6 643 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 TRAPPC12Q8WVT3 735 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 RELTQ969Z4 430 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 TLCD1Q96CP7 247 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 MRTO4Q9UKD2 239 aaKnown RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 CNOT6Q9ULM6 557 aaKnown RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 COL6A2P12110 1019 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 GNALP38405 381 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SF1Q15637 639 aaKnown RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 C15orf59Q2T9L4 293 aaPredicted RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 GFOD2Q3B7J2 385 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 RTL4Q6ZR62 310 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SV2AQ7L0J3 742 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SNX20Q7Z614 316 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 EFHD2Q96C19 240 aaPredicted RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 ITPKCQ96DU7 683 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 CERS2Q96G23 380 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 OR52E6Q96RD3 313 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 OSBPL7Q9BZF2 842 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 CROCCQ5TZA2 2017 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 TRIM64CA6NLI5 447 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 ADORA2AP29274 412 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 DNASE1L1P49184 302 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC18A1P54219 525 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC12A3P55017 1021 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC6A3Q01959 620 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 EFR3AQ14156 821 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 NRSN1Q8IZ57 195 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 RBM15BQ8NDT2 890 aaKnown RBP11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 C5orf34Q96MH7 638 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 CDH19Q9H159 772 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 OSER1Q9NX31 292 aa11.47□□□□□ -0.57
SPTBN1-202ENST00000356805 FAM205AQ6ZU69 1335 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 FAM129CQ86XR2 697 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 ZNF606Q8WXB4 792 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 ROPN1LQ96C74 230 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms