RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 LEMD2Q8NC56 503 aa12.92□□□□□ -0.34
RNF220-202ENST00000355387 ZNF420Q8TAQ5 688 aaPredicted RBP12.92□□□□□ -0.34
RNF220-202ENST00000355387 STAG3L4Q8TBR4 150 aa12.92□□□□□ -0.34
RNF220-202ENST00000355387 SEPT8Q92599 483 aa12.92□□□□□ -0.34
RNF220-202ENST00000355387 PPWD1Q96BP3 646 aaKnown RBP12.92□□□□□ -0.34
RNF220-202ENST00000355387 CNDP2Q96KP4 475 aaKnown RBP12.92□□□□□ -0.34
RNF220-202ENST00000355387 TMEM209Q96SK2 561 aa12.92□□□□□ -0.34
RNF220-202ENST00000355387 PTPN18Q99952 460 aa12.92□□□□□ -0.34
RNF220-202ENST00000355387 BRINP2Q9C0B6 783 aa12.92□□□□□ -0.34
RNF220-202ENST00000355387 OCEL1Q9H607 264 aa12.92□□□□□ -0.34
RNF220-202ENST00000355387 ZNHIT2Q9UHR6 403 aa12.92□□□□□ -0.34
RNF220-202ENST00000355387 GPR45Q9Y5Y3 372 aa12.92□□□□□ -0.34
RNF220-202ENST00000355387 LCHNA4D1U4 455 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 IQCA1LA6NCM1 817 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 SYCE1LA8MT33 242 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 J3KR12 359 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 NR5A2O00482 541 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 PIP5K1BO14986 540 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 EEDO75530 441 aaKnown RBP12.91□□□□□ -0.34
RNF220-202ENST00000355387 TIPRLO75663 272 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 ESRRGP62508 458 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 SERINC3Q13530 473 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 RCAN2Q14206 197 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 IHHQ14623 411 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 NFE2Q16621 373 aaPredicted RBP12.91□□□□□ -0.34
RNF220-202ENST00000355387 AASDHQ4L235 1098 aaPredicted RBP12.91□□□□□ -0.34
RNF220-202ENST00000355387 PLEKHG4BQ96PX9 1271 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 MID1IP1Q9NPA3 183 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 CATSPERZQ9NTU4 200 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 COMMD8Q9NX08 183 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.91□□□□□ -0.34
RNF220-202ENST00000355387 ZNF639Q9UID6 485 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 VPS9D1Q9Y2B5 631 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 OAZ2O95190 189 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 GOT2P00505 430 aaKnown RBP12.91□□□□□ -0.34
RNF220-202ENST00000355387 IGLV3-27P01718 113 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 HAPLN1P10915 354 aaPredicted RBP12.91□□□□□ -0.34
RNF220-202ENST00000355387 GFAPP14136 432 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 YWHAHQ04917 246 aaPredicted RBP12.91□□□□□ -0.34
RNF220-202ENST00000355387 RING1Q06587 406 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 MERTKQ12866 999 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 PDCD4Q53EL6 469 aaKnown RBP12.91□□□□□ -0.34
RNF220-202ENST00000355387 XKR7Q5GH72 579 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 LPCAT2Q7L5N7 544 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 PGBD5Q8N414 524 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 PNPT1Q8TCS8 783 aaKnown RBP12.91□□□□□ -0.34
RNF220-202ENST00000355387 ADI1Q9BV57 179 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 CAAP1Q9H8G2 361 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 FBRSL1Q9HCM7 1045 aaKnown RBP12.91□□□□□ -0.34
RNF220-202ENST00000355387 AIG1Q9NVV5 245 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 CMTM6Q9NX76 183 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 POLG2Q9UHN1 485 aa12.91□□□□□ -0.34
RNF220-202ENST00000355387 SNAP91O60641 907 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 PRAMEF11O60813 436 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 CLASP2O75122 1294 aaKnown RBP12.9□□□□□ -0.34
RNF220-202ENST00000355387 MOCS2O96007 188 aaPredicted RBP12.9□□□□□ -0.34
RNF220-202ENST00000355387 PCSK6P29122 969 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 PGFP49763 221 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 ITKQ08881 620 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 OR4D1Q15615 310 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 C5orf22Q49AR2 442 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 FKBP9P1Q75LS8 142 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 EPHX4Q8IUS5 362 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 TBC1D21Q8IYX1 336 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 OR4L1Q8NH43 312 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 SOCS4Q8WXH5 440 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 TMEM125Q96AQ2 219 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 DOK1Q99704 481 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 PREBQ9HCU5 417 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 MYOCOSA0A1B0GUC4 107 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 TCRBV5S2A0A599 114 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 ARPC2O15144 300 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 EMP3P54852 163 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 RAB15P59190 212 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 CLCQ05315 142 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 RPS27LQ71UM5 84 aaKnown RBP12.9□□□□□ -0.34
RNF220-202ENST00000355387 KDELC2Q7Z4H8 507 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 PIM3Q86V86 326 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 PSMG2Q969U7 264 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 TBATAQ96M53 351 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 TUBB1Q9H4B7 451 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 NLE1Q9NVX2 485 aaPredicted RBP12.9□□□□□ -0.34
RNF220-202ENST00000355387 SMOXQ9NWM0 555 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 ZIM2Q9NZV7 527 aa12.9□□□□□ -0.34
RNF220-202ENST00000355387 TRIM64BA6NI03 449 aa12.9□□□□□ -0.35
RNF220-202ENST00000355387 RAMP2O60895 175 aa12.9□□□□□ -0.35
RNF220-202ENST00000355387 MLYCDO95822 493 aa12.9□□□□□ -0.35
RNF220-202ENST00000355387 ARSAP15289 507 aa12.9□□□□□ -0.35
RNF220-202ENST00000355387 ANKS6Q68DC2 871 aa12.9□□□□□ -0.35
RNF220-202ENST00000355387 GDF6Q6KF10 455 aaPredicted RBP12.9□□□□□ -0.35
RNF220-202ENST00000355387 LAYNQ6UX15 382 aa12.9□□□□□ -0.35
RNF220-202ENST00000355387 GPR141Q7Z602 305 aa12.9□□□□□ -0.35
RNF220-202ENST00000355387 PROSER1Q86XN7 944 aa12.9□□□□□ -0.35
RNF220-202ENST00000355387 ZNF354CQ86Y25 554 aa12.9□□□□□ -0.35
RNF220-202ENST00000355387 NKAPQ8N5F7 415 aaKnown RBP12.9□□□□□ -0.35
RNF220-202ENST00000355387 FAM47BQ8NA70 645 aa12.9□□□□□ -0.35
RNF220-202ENST00000355387 PDFQ9HBH1 243 aa12.9□□□□□ -0.35
RNF220-202ENST00000355387 CCDC162PA2VCL2 907 aa12.89□□□□□ -0.35
RNF220-202ENST00000355387 IFRD1O00458 451 aaPredicted RBP12.89□□□□□ -0.35
RNF220-202ENST00000355387 ACOX3O15254 700 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms