RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 CD3EAPO15446 510 aaKnown RBP17.99■□□□□ 0.47
CTSB-202ENST00000353047 FPGSQ05932 587 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 TIGD5Q53EQ6 642 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 PTRHD1Q6GMV3 140 aaKnown RBP17.99■□□□□ 0.47
CTSB-202ENST00000353047 IFNLR1Q8IU57 520 aaPredicted RBP17.99■□□□□ 0.47
CTSB-202ENST00000353047 SLC15A3Q8IY34 581 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 TMEM102Q8N9M5 508 aaPredicted RBP17.99■□□□□ 0.47
CTSB-202ENST00000353047 OR4K2Q8NGD2 314 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 PSMA8Q8TAA3 256 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 LRRC58Q96CX6 371 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 GPATCH1Q9BRR8 931 aaKnown RBP17.99■□□□□ 0.47
CTSB-202ENST00000353047 FEM1AQ9BSK4 669 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 C6orf62Q9GZU0 229 aaPredicted RBP17.99■□□□□ 0.47
CTSB-202ENST00000353047 DDX28Q9NUL7 540 aaKnown RBP17.99■□□□□ 0.47
CTSB-202ENST00000353047 SLC30A1Q9Y6M5 507 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 TTC3P53804 2025 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 NRCAMQ92823 1304 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 MYO7AQ13402 2215 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 K7EPI3 171 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 STX7O15400 261 aaKnown RBP17.99■□□□□ 0.47
CTSB-202ENST00000353047 CST1P01037 141 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 MMP3P08254 477 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 ATXN8OSP0DMR3 200 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 GPR15P49685 360 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 CASP9P55211 416 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 RGS21Q2M5E4 152 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 KIAA2013Q8IYS2 634 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 BBS5Q8N3I7 341 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 ST3GAL5Q9UNP4 418 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 PCDHGC4Q9Y5F7 938 aa17.99■□□□□ 0.47
CTSB-202ENST00000353047 PRSS51A0A1B0GVH4 220 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 CDH3P22223 829 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 MAGEA6P43360 314 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 LHX1P48742 406 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 PTPRRQ15256 657 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 MEP1AQ16819 746 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 AASDHQ4L235 1098 aaPredicted RBP17.98■□□□□ 0.47
CTSB-202ENST00000353047 TAF2Q6P1X5 1199 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 OR10A6Q8NH74 314 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 ZNF696Q9H7X3 374 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 TMEM30AQ9NV96 361 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 KLQ9UEF7 1012 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 HAPLN1P10915 354 aaPredicted RBP17.98■□□□□ 0.47
CTSB-202ENST00000353047 AQP1P29972 269 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 MTHFRP42898 656 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 LZTR1Q8N653 840 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 CPSF7Q8N684 471 aaKnown RBP17.98■□□□□ 0.47
CTSB-202ENST00000353047 NLGN2Q8NFZ4 835 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 RCOR3Q9P2K3 495 aaPredicted RBP17.98■□□□□ 0.47
CTSB-202ENST00000353047 TRIM17Q9Y577 477 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 DNAJC15Q9Y5T4 150 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 LOC100506127A0A0U1RQW1 187 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 TRIM43BA6NCK2 446 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 RRN3P2A6NIE6 340 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 DEAF1O75398 565 aaPredicted RBP17.98■□□□□ 0.47
CTSB-202ENST00000353047 TBX4P57082 545 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 CLCQ05315 142 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 PKDCCQ504Y2 493 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 DUS1LQ6P1R4 473 aaKnown RBP17.98■□□□□ 0.47
CTSB-202ENST00000353047 SH3RF2Q8TEC5 729 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 SGCDQ92629 289 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 CENPNQ96H22 339 aaPredicted RBP17.98■□□□□ 0.47
CTSB-202ENST00000353047 C16orf70Q9BSU1 422 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 PRDM8Q9NQV8 689 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 OLAHQ9NV23 265 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 HSFX1Q9UBD0 423 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 E9PAM4 449 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 CLCN5P51795 746 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 CRTC3Q6UUV7 619 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 LINGO4Q6UY18 593 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 ZNF598Q86UK7 904 aaKnown RBP17.98■□□□□ 0.47
CTSB-202ENST00000353047 PPTC7Q8NI37 304 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 AURKBQ96GD4 344 aaPredicted RBP17.98■□□□□ 0.47
CTSB-202ENST00000353047 CAMKK2Q96RR4 588 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 CATSPERZQ9NTU4 200 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 ADAMTS5Q9UNA0 930 aa17.98■□□□□ 0.47
CTSB-202ENST00000353047 C17orf102A2RUQ5 167 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 CCDC162PA2VCL2 907 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 A8MU76 341 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 ONECUT3O60422 494 aaPredicted RBP17.97■□□□□ 0.47
CTSB-202ENST00000353047 SLC22A3O75751 556 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 CTPS1P17812 591 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 CD247P20963 164 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 DGKEP52429 567 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 ARHGEF7Q14155 803 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 KIAA0319Q5VV43 1072 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 GLT6D1Q7Z4J2 308 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 SFRP1Q8N474 314 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 PLEKHA8Q96JA3 519 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 TAS2R13Q9NYV9 303 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.97■□□□□ 0.473e-6■■■■■ 26.9
CTSB-202ENST00000353047 UPK3BL1B0FP48 263 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 UPK3BL2E5RIL1 263 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 SOCS7O14512 581 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 ACOT8O14734 319 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 NIPSNAP2O75323 286 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 SBK3P0C264 359 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 ODC1P11926 461 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 CDK18Q07002 472 aa17.97■□□□□ 0.47
CTSB-202ENST00000353047 FAM98BQ52LJ0 330 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms