RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 CXorf51AA0A1B0GTR3 108 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 KERAO60938 352 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 MT-CO1P00395 513 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 C8AP07357 584 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 PTGER3P43115 390 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 ADARP55265 1226 aaKnown RBP16.62■□□□□ 0.25
SAMM50-201ENST00000350028 NAA20P61599 178 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 HTRA4P83105 476 aaPredicted RBP16.62■□□□□ 0.25
SAMM50-201ENST00000350028 TMEM198Q66K66 360 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 PSAPL1Q6NUJ1 521 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 AAGABQ6PD74 315 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 CHSY3Q70JA7 882 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 BBS7Q8IWZ6 715 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 PIANPQ8IYJ0 282 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 STK40Q8N2I9 435 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 KREMEN2Q8NCW0 462 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 PIH1D2Q8WWB5 315 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 RSRC1Q96IZ7 334 aaKnown RBP16.62■□□□□ 0.25
SAMM50-201ENST00000350028 BIRC8Q96P09 236 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 GPR63Q9BZJ6 419 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 ZBTB26Q9HCK0 441 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 BPIFA1Q9NP55 256 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 ANGPTL2Q9UKU9 493 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 FAM50BQ9Y247 325 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 COPG1Q9Y678 874 aaKnown RBP16.62■□□□□ 0.25
SAMM50-201ENST00000350028 ALPK3Q96L96 1907 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 LAMA2P24043 3122 aaKnown RBP16.62■□□□□ 0.25
SAMM50-201ENST00000350028 H3BMM5 538 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 UBXN8O00124 270 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 SKAP2O75563 359 aaPredicted RBP16.62■□□□□ 0.25
SAMM50-201ENST00000350028 MTHFD2P13995 350 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 HMGCLP35914 325 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 VHLP40337 213 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 CDKN1CP49918 316 aaPredicted RBP16.62■□□□□ 0.25
SAMM50-201ENST00000350028 XIAPP98170 497 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 CACNG1Q06432 222 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 BCL2L1Q07817 233 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 TBL3Q12788 808 aaKnown RBP16.62■□□□□ 0.25
SAMM50-201ENST00000350028 OTOP2Q7RTS6 562 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 CLYBLQ8N0X4 340 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 PELI3Q8N2H9 469 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 EXT2Q93063 718 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.62■□□□□ 0.254e-6■■■■■ 48.1
SAMM50-201ENST00000350028 GPR21Q99679 349 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 ABCB8Q9NUT2 735 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 NDE1Q9NXR1 346 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 CDH22Q9UJ99 828 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 TMCO1Q9UM00 188 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 PRPF19Q9UMS4 504 aaKnown RBP16.62■□□□□ 0.25
SAMM50-201ENST00000350028 FIS1Q9Y3D6 152 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 SLC30A1Q9Y6M5 507 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 PTPRSQ13332 1948 aa16.62■□□□□ 0.25
SAMM50-201ENST00000350028 SYCE1LA8MT33 242 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 K7ERQ8 282 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 UBFD1O14562 309 aaKnown RBP16.61■□□□□ 0.25
SAMM50-201ENST00000350028 SOCS5O75159 536 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 TBX10O75333 385 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 ESR1P03372 595 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 CYBBP04839 570 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 FGF4P08620 206 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 LINC00271P0C7V0 271 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 AP2B1P63010 937 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 LMAN2Q12907 356 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 UGT3A1Q6NUS8 523 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 CERS6Q6ZMG9 384 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 RPS27LQ71UM5 84 aaKnown RBP16.61■□□□□ 0.25
SAMM50-201ENST00000350028 FBXW8Q8N3Y1 598 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 KLHL23Q8NBE8 558 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 KYQ8NBH2 561 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 TTC16Q8NEE8 873 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 BHMTQ93088 406 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 EMILIN2Q9BXX0 1053 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 TM6SF2Q9BZW4 377 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 TNFRSF12AQ9NP84 129 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 EVLQ9UI08 416 aaPredicted RBP16.61■□□□□ 0.25
SAMM50-201ENST00000350028 TRMT6Q9UJA5 497 aaKnown RBP16.61■□□□□ 0.25
SAMM50-201ENST00000350028 RNF112Q9ULX5 631 aa16.61■□□□□ 0.25
SAMM50-201ENST00000350028 A0A1W2PRU2 124 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 GOLGA8CPA6NN73 597 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 ZBBXA8MT70 800 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 LEFTY2O00292 366 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 AIM2O14862 343 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 HTRA2O43464 458 aaPredicted RBP16.6■□□□□ 0.25
SAMM50-201ENST00000350028 GPC4O75487 556 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 GFAPP14136 432 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 SQLEQ14534 574 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 TAF11Q15544 211 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 PFKFB4Q16877 469 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 COL13A1Q5TAT6 717 aaPredicted RBP16.6■□□□□ 0.25
SAMM50-201ENST00000350028 TAS2R42Q7RTR8 314 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 LYSMD3Q7Z3D4 306 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 NECAB2Q7Z6G3 386 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 CAMK1DQ8IU85 385 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 FBXO39Q8N4B4 442 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 JADE3Q92613 823 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 KCNJ9Q92806 393 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 CLP1Q92989 425 aaKnown RBP16.6■□□□□ 0.25
SAMM50-201ENST00000350028 FAM136AQ96C01 138 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 SERPINI1Q99574 410 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 EFCAB1Q9HAE3 211 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms