RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CDKN1CP49918 316 aaPredicted RBP18.59■□□□□ 0.57
PTN-201ENST00000348225 ADARP55265 1226 aaKnown RBP18.59■□□□□ 0.57
PTN-201ENST00000348225 CDKN2DP55273 166 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 FAM83EQ2M2I3 478 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 GPR33Q49SQ1 333 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 AGAP9Q5VTM2 703 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 ERAP2Q6P179 960 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 KLC3Q6P597 504 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 PIGWQ7Z7B1 504 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 DSG4Q86SJ6 1040 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 CACNA2D3Q8IZS8 1091 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 CENPLQ8N0S6 344 aaPredicted RBP18.59■□□□□ 0.57
PTN-201ENST00000348225 PPP1R14CQ8TAE6 165 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 SCYL1Q96KG9 808 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 ELAC2Q9BQ52 826 aaKnown RBP18.59■□□□□ 0.57
PTN-201ENST00000348225 ASB8Q9H765 288 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 IL26Q9NPH9 171 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 PKD2L2Q9NZM6 624 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 STARD13Q9Y3M8 1113 aa18.59■□□□□ 0.57
PTN-201ENST00000348225 KPNA3O00505 521 aaPredicted RBP18.58■□□□□ 0.56
PTN-201ENST00000348225 CPA3P15088 417 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 FMO4P31512 558 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 SUOXP51687 545 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 PTSQ03393 145 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 PDAP1Q13442 181 aaKnown RBP18.58■□□□□ 0.56
PTN-201ENST00000348225 NFATC2Q13469 925 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 PCLAFQ15004 111 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 CHI3L2Q15782 390 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 LRRC8EQ6NSJ5 796 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 TTC7BQ86TV6 843 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 SFTPA1Q8IWL2 248 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 CHFRQ96EP1 664 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 PPP1R16AQ96I34 528 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 SEC16BQ96JE7 1060 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 PLEKHG4BQ96PX9 1271 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 TSSK1BQ9BXA7 367 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 PCDH12Q9NPG4 1184 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 RAD18Q9NS91 495 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 TAS2R13Q9NYV9 303 aa18.58■□□□□ 0.56
PTN-201ENST00000348225 TICRRQ7Z2Z1 1910 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 GOLGA8CPA6NN73 597 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 H3BQ06 376 aaPredicted RBP18.57■□□□□ 0.56
PTN-201ENST00000348225 EBAG9O00559 213 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 GAPDHSO14556 408 aaPredicted RBP18.57■□□□□ 0.56
PTN-201ENST00000348225 NPC1O15118 1278 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 RHOBTB1O94844 696 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 ESR1P03372 595 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 PYGLP06737 847 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 C1SP09871 688 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 LTA4HP09960 611 aaKnown RBP18.57■□□□□ 0.56
PTN-201ENST00000348225 PKMP14618 531 aaKnown RBP18.57■□□□□ 0.56
PTN-201ENST00000348225 ZNF7P17097 686 aaPredicted RBP18.57■□□□□ 0.56
PTN-201ENST00000348225 ITGB7P26010 798 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 ALDH3A1P30838 453 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 IL12RB1P42701 662 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 PGGT1BP53609 377 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 SEMG2Q02383 582 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 LRRC73Q5JTD7 316 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 DPPA4Q7L190 304 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 SERPINA9Q86WD7 417 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 ANKS4BQ8N8V4 417 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 CCDC197Q8NCU1 140 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 PIP4K2CQ8TBX8 421 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 ZNF398Q8TD17 642 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 NXNL1Q96CM4 212 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 SLCO1B3Q9NPD5 702 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 CRLS1Q9UJA2 301 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 PCDHB1Q9Y5F3 818 aa18.57■□□□□ 0.56
PTN-201ENST00000348225 TRBV5-4A0A0C4DH59 114 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 C1QTNF3-AMACRE9PGA6 284 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 SNX3O60493 162 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 VPS26AO75436 327 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 IL1BP01584 269 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 CCDC166P0CW27 439 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 MYL2P10916 166 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 TNFRSF4P43489 277 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 SPINT3P49223 89 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 CSHL1Q14406 222 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 EGFLAMQ63HQ2 1017 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 PARS2Q7L3T8 475 aaKnown RBP18.56■□□□□ 0.56
PTN-201ENST00000348225 SPATA21Q7Z572 469 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 SPATS2Q86XZ4 545 aaKnown RBP18.56■□□□□ 0.56
PTN-201ENST00000348225 RBFAQ8N0V3 343 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 FSTL5Q8N475 847 aaPredicted RBP18.56■□□□□ 0.56
PTN-201ENST00000348225 UBXN10Q96LJ8 280 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 P2RY13Q9BPV8 354 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 MRPL46Q9H2W6 279 aaKnown RBP18.56■□□□□ 0.56
PTN-201ENST00000348225 SYTL2Q9HCH5 934 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 DYRK4Q9NR20 520 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 PPM1HQ9ULR3 514 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 COLQQ9Y215 455 aaPredicted RBP18.56■□□□□ 0.56
PTN-201ENST00000348225 SZT2Q5T011 3432 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 TCF20Q9UGU0 1960 aaKnown RBP18.56■□□□□ 0.56
PTN-201ENST00000348225 PRMT5O14744 637 aaPredicted RBP18.56■□□□□ 0.56
PTN-201ENST00000348225 H2AFYO75367 372 aaKnown RBP18.56■□□□□ 0.56
PTN-201ENST00000348225 WISP3O95389 354 aaPredicted RBP18.56■□□□□ 0.56
PTN-201ENST00000348225 EPHX1P07099 455 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 HNRNPLP14866 589 aaKnown RBP eCLIP18.56■□□□□ 0.56
PTN-201ENST00000348225 CD9P21926 228 aa18.56■□□□□ 0.56
PTN-201ENST00000348225 KCNA4P22459 653 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms