RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PERM1Q5SV97 790 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 DEPDC1Q5TB30 811 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 STX19Q8N4C7 294 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 EMID1Q96A84 441 aaPredicted RBP14.7□□□□□ -0.06
NUP50-201ENST00000347635 NTAN1Q96AB6 310 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 PIWIL1Q96J94 861 aaKnown RBP14.7□□□□□ -0.06
NUP50-201ENST00000347635 KCNK13Q9HB14 408 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 MYH11P35749 1972 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 GLUD1P00367 558 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 SYPL2Q5VXT5 272 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 ERAP2Q6P179 960 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 DQX1Q8TE96 717 aaKnown RBP14.7□□□□□ -0.06
NUP50-201ENST00000347635 TPD52L3Q96J77 140 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 SPASTQ9UBP0 616 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 ITGB1BP2Q9UKP3 347 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 MATN2O00339 956 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 TRIM24O15164 1050 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 CXCL14O95715 111 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 HDCP19113 662 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 ATP6V1E1P36543 226 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 PIK3CGP48736 1102 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 MRPL28Q13084 256 aaKnown RBP14.7□□□□□ -0.06
NUP50-201ENST00000347635 GLYATQ6IB77 296 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 LDB1Q86U70 411 aaPredicted RBP14.7□□□□□ -0.06
NUP50-201ENST00000347635 LEMD2Q8NC56 503 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 COX4I2Q96KJ9 171 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 PDLIM7Q9NR12 457 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 MOCS1Q9NZB8 636 aa14.7□□□□□ -0.06
NUP50-201ENST00000347635 H3BSA7 217 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 RPP40O75818 363 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 BRCC3P46736 316 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 LILRA4P59901 499 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 POLR2LP62875 67 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 TSTD2Q5T7W7 516 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 KIAA0930Q6ICG6 404 aaPredicted RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 GCNT7Q6ZNI0 430 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 TAC4Q86UU9 113 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 C11orf49Q9H6J7 331 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 NPEPPSL1A6NEC2 478 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 TMEM233B4DJY2 109 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 DLX3O60479 287 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 ARIH2O95376 493 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 MED26O95402 600 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 DGKAP23743 735 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 EDNRBP24530 442 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 TARBP2Q15633 366 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 ARHGAP36Q6ZRI8 547 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 ZC3HC1Q86WB0 502 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 GPR22Q99680 433 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 SMPD4Q9NXE4 827 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 ADAMTS5Q9UNA0 930 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 MGAT4DA6NG13 374 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 YJEFN3A6XGL0 299 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 E9PAM4 449 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 PIP5K1BO14986 540 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 GM2AP17900 193 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 KRT20P35900 424 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 CHI3L1P36222 383 aaPredicted RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 CAPGP40121 348 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 OLIG2Q13516 323 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 PAFAH1B3Q15102 231 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 CSGALNACT1Q8TDX6 532 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 MTFMTQ96DP5 389 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 PIGVQ9NUD9 493 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 ARL5CA6NH57 179 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 C9JVG2 144 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 OTCP00480 354 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 CES1P23141 567 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 GSSP48637 474 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 PURAQ00577 322 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 CNSTQ6PJW8 725 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 THAP5Q7Z6K1 395 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 CTU1Q7Z7A3 348 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 OFCC1Q8IZS5 231 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 PLD6Q8N2A8 252 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 HJURPQ8NCD3 748 aaPredicted RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 LINGO1Q96FE5 620 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 PCED1BQ96HM7 432 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 ROGDIQ9GZN7 287 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 POLR3HQ9Y535 204 aaPredicted RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 RRM2P31350 389 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 OR8H2Q8N162 312 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 UTP15Q8TED0 518 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 WDR12Q9GZL7 423 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 SLC25A51Q9H1U9 297 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 NOL6Q9H6R4 1146 aaKnown RBP14.69□□□□□ -0.06
NUP50-201ENST00000347635 RAD18Q9NS91 495 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 ADPRHL2Q9NX46 363 aa14.69□□□□□ -0.06
NUP50-201ENST00000347635 RGS20O76081 388 aa14.68□□□□□ -0.06
NUP50-201ENST00000347635 CYP2A6P11509 494 aaPredicted RBP14.68□□□□□ -0.06
NUP50-201ENST00000347635 MTHFRP42898 656 aa14.68□□□□□ -0.06
NUP50-201ENST00000347635 RXRGP48443 463 aa14.68□□□□□ -0.06
NUP50-201ENST00000347635 LCP2Q13094 533 aa14.68□□□□□ -0.06
NUP50-201ENST00000347635 ARMCX4Q5H9R4 360 aa14.68□□□□□ -0.06
NUP50-201ENST00000347635 FAM91A1Q658Y4 838 aa14.68□□□□□ -0.06
NUP50-201ENST00000347635 CRYBG2Q8N1P7 616 aa14.68□□□□□ -0.06
NUP50-201ENST00000347635 PDPRQ8NCN5 879 aa14.68□□□□□ -0.06
NUP50-201ENST00000347635 FBXO27Q8NI29 283 aa14.68□□□□□ -0.06
NUP50-201ENST00000347635 SPPL2AQ8TCT8 520 aa14.68□□□□□ -0.06
NUP50-201ENST00000347635 PCYT2Q99447 389 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms