RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 MRASO14807 208 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 AZIN1O14977 448 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 SRP72O76094 671 aaKnown RBP15.38■□□□□ 0.05
UPF3B-202ENST00000345865 PIM1P11309 404 aaPredicted RBP15.38■□□□□ 0.05
UPF3B-202ENST00000345865 GFAPP14136 432 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 PSMA3P25788 255 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 MTA1Q13330 715 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 MAPRE2Q15555 327 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 IL23RQ5VWK5 629 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 KANK2Q63ZY3 851 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 APLFQ8IW19 511 aaPredicted RBP15.38■□□□□ 0.05
UPF3B-202ENST00000345865 TMEM102Q8N9M5 508 aaPredicted RBP15.38■□□□□ 0.05
UPF3B-202ENST00000345865 SEPT8Q92599 483 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 LRGUKQ96M69 825 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 BTBD9Q96Q07 612 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 DERL2Q9GZP9 239 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 HMX1Q9NP08 348 aaPredicted RBP15.38■□□□□ 0.05
UPF3B-202ENST00000345865 BPIFA1Q9NP55 256 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 TAS2R13Q9NYV9 303 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 RAI2Q9Y5P3 530 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 ANAPC1Q9H1A4 1944 aa15.38■□□□□ 0.05
UPF3B-202ENST00000345865 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 LCHNA4D1U4 455 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 C9JVG2 144 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 GPR39O43194 453 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 SNAP91O60641 907 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 KERAO60938 352 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 ECI2O75521 394 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 EEF1DP29692 281 aaKnown RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 YBX1P67809 324 aaKnown RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 NOGQ13253 232 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 ZNF177Q13360 481 aaPredicted RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 BFSP2Q13515 415 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 PDK3Q15120 406 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 PTPRNQ16849 979 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 PITRM1Q5JRX3 1037 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 RNF219Q5W0B1 726 aaPredicted RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 AFTPHQ6ULP2 937 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 UGT2A3Q6UWM9 527 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 DLG3Q92796 817 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 FUBP1Q96AE4 644 aaKnown RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 CDK5RAP1Q96SZ6 601 aaKnown RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 CLSTN3Q9BQT9 956 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 SLC25A23Q9BV35 468 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 SUCOQ9UBS9 1254 aaKnown RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 FKBPLQ9UIM3 349 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 BTRCQ9Y297 605 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 FNDC3AQ9Y2H6 1198 aaKnown RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 TBC1D30Q9Y2I9 924 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 SUPT3HB4E1H0 165 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 ANKRD66B4E2M5 251 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 SUPT3HO75486 399 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 TSPAN12O95859 305 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 CAPNS1P04632 268 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 HOXD10P28358 340 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 PRDX3P30048 256 aaKnown RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 GRIA2P42262 883 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 ACADVLP49748 655 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 AGTR2P50052 363 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 ATP4BP51164 291 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 CLCQ05315 142 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 TRAF2Q12933 501 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 GRM2Q14416 872 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 GEN1Q17RS7 908 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 C6orf10Q5SRN2 563 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 ADGRF1Q5T601 910 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 KLHDC10Q6PID8 442 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 STAG3L4Q8TBR4 150 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 SPAG4Q9NPE6 437 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 SEMA4BQ9NPR2 832 aaPredicted RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 MRGBPQ9NV56 204 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 UBAP1Q9NZ09 502 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 TMEM181Q9P2C4 612 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 MAP10Q9P2G4 905 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 BCAP29Q9UHQ4 241 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 ZNF225Q9UK10 706 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 RNF112Q9ULX5 631 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 ARIH1Q9Y4X5 557 aaPredicted RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 OAS3Q9Y6K5 1087 aaKnown RBP15.37■□□□□ 0.05
UPF3B-202ENST00000345865 AK5Q9Y6K8 562 aa15.37■□□□□ 0.05
UPF3B-202ENST00000345865 A0A1B0GVM2 712 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 NPEPPSL1A6NEC2 478 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 NCF1BA6NI72 391 aaPredicted RBP15.36■□□□□ 0.05
UPF3B-202ENST00000345865 ENO4A6NNW6 628 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 NCF1CA8MVU1 366 aaPredicted RBP15.36■□□□□ 0.05
UPF3B-202ENST00000345865 NIPSNAP2O75323 286 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 NDUFS3O75489 264 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 PRAMEF12O95522 483 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 LINC00032P0C843 101 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 BMP1P13497 986 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 NCF1P14598 390 aaPredicted RBP15.36■□□□□ 0.05
UPF3B-202ENST00000345865 TUFMP49411 452 aaKnown RBP15.36■□□□□ 0.05
UPF3B-202ENST00000345865 CTSL3PQ5NE16 218 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 RARS2Q5T160 578 aaKnown RBP15.36■□□□□ 0.05
UPF3B-202ENST00000345865 SLCO4A1Q96BD0 722 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 PLD4Q96BZ4 506 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 MRPL9Q9BYD2 267 aaKnown RBP15.36■□□□□ 0.05
UPF3B-202ENST00000345865 CWH43Q9H720 699 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 SYTL2Q9HCH5 934 aa15.36■□□□□ 0.05
UPF3B-202ENST00000345865 A0A0J9YYE9 177 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms