RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PLEKHA1Q9HB21 404 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 GRHL1Q9NZI5 618 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 MRPS33Q9Y291 106 aaKnown RBP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 PCDHGB6Q9Y5F9 930 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 OR2AT4A6NND4 320 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 SLC9A3R1O14745 358 aaPredicted RBP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 YBX3P16989 372 aaKnown RBP eCLIP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 APTXQ7Z2E3 356 aaKnown RBP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 MPP5Q8N3R9 675 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 GSTCDQ8NEC7 633 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 TBC1D16Q8TBP0 767 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 CLP1Q92989 425 aaKnown RBP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 SLC35C1Q96A29 364 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 MRPL9Q9BYD2 267 aaKnown RBP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 TBCCD1Q9NVR7 557 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 CLPXO76031 633 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 SLC25A25Q6KCM7 469 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 PACRGLQ8N7B6 248 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 PCDHB5Q9Y5E4 795 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 PCDHGB7Q9Y5F8 929 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 ERCC6L2Q5T890 1561 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 PDE2AO00408 941 aaPredicted RBP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 OAZ1P54368 228 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 LARS2Q15031 903 aaKnown RBP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 C6orf52Q5T4I8 152 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 SETD4Q9NVD3 440 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 PDP1Q9P0J1 537 aaPredicted RBP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 SLC6A4P31645 630 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 MAGEA12P43365 314 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 C15orf59Q2T9L4 293 aaPredicted RBP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 TSEN15Q8WW01 171 aaKnown RBP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 ARCN1P48444 511 aaKnown RBP19.31■□□□□ 0.68
HDAC4-201ENST00000345617 BNIP1Q12981 228 aa19.31■□□□□ 0.68
HDAC4-201ENST00000345617 CSF1RP07333 972 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 ACSL1P33121 698 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 SLC12A3P55017 1021 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 RASGEF1BQ0VAM2 473 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 CNPY1Q3B7I2 92 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 HDDC3Q8N4P3 179 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 PNMA5Q96PV4 448 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 DNAJC11Q9NVH1 559 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 MTMR10Q9NXD2 777 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 SAGP10523 405 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-201ENST00000345617 SNAPC1Q16533 368 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 RANBP3LQ86VV4 465 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-201ENST00000345617 IQCF2Q8IXL9 164 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 PCSK9Q8NBP7 692 aaKnown RBP19.3■□□□□ 0.68
HDAC4-201ENST00000345617 GFM1Q96RP9 751 aaKnown RBP19.3■□□□□ 0.68
HDAC4-201ENST00000345617 SPG21Q9NZD8 308 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 ASXL3Q9C0F0 2248 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 EFCAB9A8MZ26 197 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 SCELO95171 688 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 ASLP04424 464 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 NTRK1P04629 796 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 CD86P42081 329 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 PDX1P52945 283 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 ILF3Q12906 894 aaKnown RBP eCLIP19.3■□□□□ 0.682e-8■□□□□ 8.2
HDAC4-201ENST00000345617 ZNF451Q9Y4E5 1061 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 ELOVL7A1L3X0 281 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 H7C2Y5 167 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 TIPRLO75663 272 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 HNRNPH3P31942 346 aaKnown RBP19.3■□□□□ 0.68
HDAC4-201ENST00000345617 HTR7P34969 479 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 CBLBQ13191 982 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 VWA5B1Q5TIE3 1220 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 GLB1L3Q8NCI6 653 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-201ENST00000345617 HTATIP2Q9BUP3 242 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 KRT33AO76009 404 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 KIR3DL1P43629 444 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 TFAP2DQ7Z6R9 452 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 BRSK2Q8IWQ3 736 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 GLT1D1Q96MS3 346 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 C14orf105Q9NVL8 296 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 PCDHB12Q9Y5F1 795 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 KNTC1P50748 2209 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-201ENST00000345617 KCNK1O00180 336 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 CDC42EP5Q6NZY7 148 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 FRMD6Q96NE9 622 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 GPER1Q99527 375 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 PXMP2Q9NR77 195 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 ANXA2P2A6NMY6 339 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 CD2P06729 351 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 ANXA2P07355 339 aaKnown RBP19.3■□□□□ 0.68
HDAC4-201ENST00000345617 TNS4Q8IZW8 715 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 C3orf14Q9HBI5 128 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 PMF1-BGLAPU3KQ54 211 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 VWDEQ8N2E2 1590 aa19.3■□□□□ 0.68
HDAC4-201ENST00000345617 A0A1B0GVC2 190 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 TRIM3O75382 744 aaPredicted RBP19.29■□□□□ 0.68
HDAC4-201ENST00000345617 PRAMEF1O95521 474 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 METTL7BQ6UX53 244 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 BBS12Q6ZW61 710 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 RIOX1Q9H6W3 641 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 CAPN8A6NHC0 703 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 SLC28A2O43868 658 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 DNTTP04053 509 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 BPGMP07738 259 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 OR2B6P58173 313 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 MPP2Q14168 576 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms