RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 OGFOD3Q6PK18 319 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 DOK6Q6PKX4 331 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 ADAMTSL4Q6UY14 1074 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 RBM44Q6ZP01 1051 aaKnown RBP14.36□□□□□ -0.11
HMGN3-202ENST00000344726 LYSMD3Q7Z3D4 306 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 TAF8Q7Z7C8 310 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 B3GNT8Q7Z7M8 397 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 NLRP8Q86W28 1048 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 LRRC57Q8N9N7 239 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 SPC24Q8NBT2 197 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 FAM46DQ8NEK8 389 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 TFB1MQ8WVM0 346 aaKnown RBP14.36□□□□□ -0.11
HMGN3-202ENST00000344726 SCG3Q8WXD2 468 aaKnown RBP14.36□□□□□ -0.11
HMGN3-202ENST00000344726 P3H4Q92791 437 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 FGF11Q92914 225 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 NAT6Q93015 286 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 RBM41Q96IZ5 413 aaKnown RBP14.36□□□□□ -0.11
HMGN3-202ENST00000344726 HIC2Q96JB3 615 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 TEKT5Q96M29 485 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 POLR1BQ9H9Y6 1135 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 SPATS2LQ9NUQ6 558 aaKnown RBP14.36□□□□□ -0.11
HMGN3-202ENST00000344726 DNPEPQ9ULA0 475 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 SLC17A4Q9Y2C5 497 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 TMEM98Q9Y2Y6 226 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 PLEKHM1Q9Y4G2 1056 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 MGAQ8IWI9 3026 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 GRID2IPA4D2P6 1211 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 TCEA3O75764 348 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 DXOO77932 396 aaKnown RBP14.35□□□□□ -0.11
HMGN3-202ENST00000344726 AK4P27144 223 aaPredicted RBP14.35□□□□□ -0.11
HMGN3-202ENST00000344726 CDC25BP30305 580 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 ABCG1P45844 678 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 GNPDA1P46926 289 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 LSSP48449 732 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 SPINT3P49223 89 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 CCL7P80098 99 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 SLC14A2Q15849 920 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 SOWAHCQ53LP3 525 aaPredicted RBP14.35□□□□□ -0.11
HMGN3-202ENST00000344726 HENMT1Q5T8I9 393 aaKnown RBP14.35□□□□□ -0.11
HMGN3-202ENST00000344726 AADACL2Q6P093 401 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 BBS12Q6ZW61 710 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 BZW1Q7L1Q6 419 aaKnown RBP14.35□□□□□ -0.11
HMGN3-202ENST00000344726 NRSN1Q8IZ57 195 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 GPBAR1Q8TDU6 330 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 ALG3Q92685 438 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 SCARF2Q96GP6 870 aaPredicted RBP14.35□□□□□ -0.11
HMGN3-202ENST00000344726 COX14Q96I36 57 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 QKIQ96PU8 341 aaKnown RBP eCLIP14.35□□□□□ -0.11
HMGN3-202ENST00000344726 DESI2Q9BSY9 194 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 ADGRE3Q9BY15 652 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 SYNDIG1Q9H7V2 258 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 C10orf88Q9H8K7 445 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 UBP1Q9NZI7 540 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 TRIM10Q9UDY6 481 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 CNOT6Q9ULM6 557 aaKnown RBP14.35□□□□□ -0.11
HMGN3-202ENST00000344726 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.35□□□□□ -0.11
HMGN3-202ENST00000344726 PCDHA3Q9Y5H8 950 aa14.35□□□□□ -0.11
HMGN3-202ENST00000344726 PCYT1BQ9Y5K3 369 aaPredicted RBP14.35□□□□□ -0.11
HMGN3-202ENST00000344726 FADS2P1A8MWK0 482 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 B4DGG1 531 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 F5H423 210 aaPredicted RBP14.34□□□□□ -0.11
HMGN3-202ENST00000344726 INPP4BO15327 924 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 PMPCBO75439 489 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 IPO7O95373 1038 aaKnown RBP14.34□□□□□ -0.11
HMGN3-202ENST00000344726 RPLP0P05388 317 aaKnown RBP14.34□□□□□ -0.11
HMGN3-202ENST00000344726 IVLP07476 585 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 NFKB1P19838 968 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 CTNNA2P26232 953 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 ACTN2P35609 894 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 NAP1L1P55209 391 aaKnown RBP14.34□□□□□ -0.11
HMGN3-202ENST00000344726 CDK18Q07002 472 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 CCDC173Q0VFZ6 552 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 HLTFQ14527 1009 aaKnown RBP eCLIP14.34□□□□□ -0.11
HMGN3-202ENST00000344726 NOMO1Q15155 1222 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 CERCAMQ5T4B2 595 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 KDELC1Q6UW63 502 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 TMPRSS9Q7Z410 1059 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 RAVER1Q8IY67 606 aaKnown RBP14.34□□□□□ -0.11
HMGN3-202ENST00000344726 ZNF567Q8N184 647 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 KIAA1524Q8TCG1 905 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 TRNAU1APQ9NX07 287 aaKnown RBP14.34□□□□□ -0.11
HMGN3-202ENST00000344726 SHOC2Q9UQ13 582 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 SPO11Q9Y5K1 396 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 OAS3Q9Y6K5 1087 aaKnown RBP14.34□□□□□ -0.11
HMGN3-202ENST00000344726 RNF215Q9Y6U7 377 aa14.34□□□□□ -0.11
HMGN3-202ENST00000344726 D6RAR5 112 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 APOC4-APOC2K7ER74 178 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 AURKAO14965 403 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 APOC2P02655 101 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 ATP1A1P05023 1023 aaKnown RBP14.33□□□□□ -0.12
HMGN3-202ENST00000344726 FGF1P05230 155 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 ADCY8P40145 1251 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 MAZP56270 477 aaKnown RBP14.33□□□□□ -0.12
HMGN3-202ENST00000344726 COPS2P61201 443 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 CTBSQ01459 385 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 TLE3Q04726 772 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 SPIDRQ14159 915 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 C14orf28Q4W4Y0 310 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 MARK2Q7KZI7 788 aaKnown RBP14.33□□□□□ -0.12
HMGN3-202ENST00000344726 TMC3Q7Z5M5 1100 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms