RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 NCF1CA8MVU1 366 aaPredicted RBP21.32■■□□□ 1
CCDC38-201ENST00000344280 COCHO43405 550 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 AHCYL1O43865 530 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 TSPAN3O60637 253 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 SRP72O76094 671 aaKnown RBP21.32■■□□□ 1
CCDC38-201ENST00000344280 C8BP07358 591 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 NCF1P14598 390 aaPredicted RBP21.32■■□□□ 1
CCDC38-201ENST00000344280 SELPP16109 830 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 CDH4P55283 916 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 RPL26P61254 145 aaKnown RBP21.32■■□□□ 1
CCDC38-201ENST00000344280 VPS26BQ4G0F5 336 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 ACBD5Q5T8D3 534 aaPredicted RBP21.32■■□□□ 1
CCDC38-201ENST00000344280 PSAPL1Q6NUJ1 521 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 LPCAT1Q8NF37 534 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 FAM110BQ8TC76 370 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 LRTOMTQ8WZ04 291 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 KIAA1191Q96A73 305 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 CNBD2Q96M20 576 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 GPR21Q99679 349 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 TTLL2Q9BWV7 592 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 TDRD1Q9BXT4 1180 aaKnown RBP21.32■■□□□ 1
CCDC38-201ENST00000344280 MAP10Q9P2G4 905 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 RIMKLBQ9ULI2 386 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 AP4S1Q9Y587 144 aa21.32■■□□□ 1
CCDC38-201ENST00000344280 CBX4O00257 560 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 NR5A2O00482 541 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 SCAMP3O14828 347 aaKnown RBP21.31■■□□□ 1
CCDC38-201ENST00000344280 KDELR3O43731 214 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 ECI2O75521 394 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 PRDX3P30048 256 aaKnown RBP21.31■■□□□ 1
CCDC38-201ENST00000344280 ACADVLP49748 655 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 AGTR2P50052 363 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 CYTH1Q15438 398 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 LHX8Q68G74 356 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 C16orf59Q7L2K0 433 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 RAB44Q7Z6P3 723 aaPredicted RBP21.31■■□□□ 1
CCDC38-201ENST00000344280 FBXO22Q8NEZ5 403 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 BIRC8Q96P09 236 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 BPIFA1Q9NP55 256 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 MRGBPQ9NV56 204 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 INTS10Q9NVR2 710 aaKnown RBP21.31■■□□□ 1
CCDC38-201ENST00000344280 RNF112Q9ULX5 631 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 LAMA3Q16787 3333 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 MYOCOSA0A1B0GUC4 107 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 GPR39O43194 453 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 KERAO60938 352 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 PGM3O95394 542 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 SMIM18P0DKX4 95 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 COL6A1P12109 1028 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 CAPN3P20807 821 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 STX1BP61266 288 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 RHDQ02161 417 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 CLCQ05315 142 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 BBS5Q8N3I7 341 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 SPATA16Q9BXB7 569 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 ELAC1Q9H777 363 aaKnown RBP21.31■■□□□ 1
CCDC38-201ENST00000344280 SCUBE2Q9NQ36 999 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 TAS2R13Q9NYV9 303 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 SRRDQ9UH36 339 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 TIMM22Q9Y584 194 aa21.31■■□□□ 1
CCDC38-201ENST00000344280 ANKRD36A6QL64 1941 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 ZNF840PA6NDX5 716 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 NPEPPSL1A6NEC2 478 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 HOXB8P17481 243 aaPredicted RBP21.3■■□□□ 1
CCDC38-201ENST00000344280 CHRM3P20309 590 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 SLC11A2P49281 568 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 ATP4BP51164 291 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 TAF1AQ15573 450 aaPredicted RBP21.3■■□□□ 1
CCDC38-201ENST00000344280 NRF1Q16656 503 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 PTPRNQ16849 979 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 CNPY1Q3B7I2 92 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 SLC30A9Q6PML9 568 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 LINGO4Q6UY18 593 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 ANKS3Q6ZW76 656 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 SATL1Q86VE3 508 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 FBXO39Q8N4B4 442 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 STAG3L4Q8TBR4 150 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 FUBP1Q96AE4 644 aaKnown RBP21.3■■□□□ 1
CCDC38-201ENST00000344280 ESAMQ96AP7 390 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 DERL2Q9GZP9 239 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 POLG2Q9UHN1 485 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 FKBPLQ9UIM3 349 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 RAB26Q9ULW5 256 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 TBKBP1A7MCY6 615 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 AOC2O75106 756 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 NDUFS3O75489 264 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 F11P03951 625 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 IRF1P10914 325 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 ZNF26P17031 533 aaPredicted RBP21.3■■□□□ 1
CCDC38-201ENST00000344280 CORO1AP31146 461 aaKnown RBP21.3■■□□□ 1
CCDC38-201ENST00000344280 AFTPHQ6ULP2 937 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 TUBGCP3Q96CW5 907 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 COMMD8Q9NX08 183 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 AGO1Q9UL18 857 aaKnown RBP21.3■■□□□ 1
CCDC38-201ENST00000344280 LRFN2Q9ULH4 789 aa21.3■■□□□ 1
CCDC38-201ENST00000344280 LCHNA4D1U4 455 aa21.29■■□□□ 1
CCDC38-201ENST00000344280 AP1G1O43747 822 aa21.29■■□□□ 1
CCDC38-201ENST00000344280 NIPSNAP2O75323 286 aa21.29■■□□□ 1
CCDC38-201ENST00000344280 STC2O76061 302 aa21.29■■□□□ 1
CCDC38-201ENST00000344280 HGFP14210 728 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms