RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 WFDC5Q8TCV5 224 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 C3orf30Q96M34 536 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 CDRT15Q96T59 188 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 SLC30A3Q99726 388 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 ERVK-6Q9BXR3 956 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 ZNF334Q9HCZ1 680 aaPredicted RBP12.66□□□□□ -0.38
RNF13-201ENST00000344229 NDE1Q9NXR1 346 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 H3BNX3 289 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 MAP3K7O43318 606 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 OR1I1O60431 355 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 GREM1O60565 184 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 TMCC1O94876 653 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 MT-CO1P00395 513 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 C1RP00736 705 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 PSMA3P25788 255 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 ADSLP30566 484 aaPredicted RBP12.66□□□□□ -0.38
RNF13-201ENST00000344229 ALDH1A3P47895 512 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 NFKB2Q00653 900 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 TLE2Q04725 743 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 GALNT1Q10472 559 aaPredicted RBP12.66□□□□□ -0.38
RNF13-201ENST00000344229 ZNF423Q2M1K9 1284 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 PTGR2Q8N8N7 351 aaPredicted RBP12.66□□□□□ -0.38
RNF13-201ENST00000344229 NCSTNQ92542 709 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 USP13Q92995 863 aaPredicted RBP12.66□□□□□ -0.38
RNF13-201ENST00000344229 TRMT2BQ96GJ1 504 aaKnown RBP12.66□□□□□ -0.38
RNF13-201ENST00000344229 BIRC8Q96P09 236 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 NSUN5Q96P11 429 aaKnown RBP12.66□□□□□ -0.38
RNF13-201ENST00000344229 ATOH8Q96SQ7 321 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 OGDHLQ9ULD0 1010 aa12.66□□□□□ -0.38
RNF13-201ENST00000344229 SCN8AQ9UQD0 1980 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 PTPRSQ13332 1948 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 A0A1B0GTL3 188 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 ATP6AP2A0A1C7CYW4 349 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 ANKRD66B4E2M5 251 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 ATP6AP2O75787 350 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 PRAMEF12O95522 483 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 THOP1P52888 689 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 PKNOX1P55347 436 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 HERC3Q15034 1050 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 PIGGQ5H8A4 983 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
RNF13-201ENST00000344229 KBTBD6Q86V97 674 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 CARNMT1Q8N4J0 409 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 RNF148Q8N7C7 305 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 INTS10Q9NVR2 710 aaKnown RBP12.65□□□□□ -0.38
RNF13-201ENST00000344229 FKBPLQ9UIM3 349 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 PTGDR2Q9Y5Y4 395 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 GMEB1Q9Y692 573 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 MYOFQ9NZM1 2061 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 GPR39O43194 453 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 HNRNPRO43390 633 aaKnown RBP12.65□□□□□ -0.38
RNF13-201ENST00000344229 TBL1XO60907 577 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 MBL2P11226 248 aaPredicted RBP12.65□□□□□ -0.38
RNF13-201ENST00000344229 ENO3P13929 434 aaPredicted RBP12.65□□□□□ -0.38
RNF13-201ENST00000344229 FOXA1P55317 472 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 PDAP1Q13442 181 aaKnown RBP12.65□□□□□ -0.38
RNF13-201ENST00000344229 CEACAM7Q14002 265 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 PFKFB4Q16877 469 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 FBXO48Q5FWF7 155 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 LPCAT4Q643R3 524 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 BHMTQ93088 406 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 ZNF184Q99676 751 aaPredicted RBP12.65□□□□□ -0.38
RNF13-201ENST00000344229 POPDC3Q9HBV1 291 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 FBRSL1Q9HCM7 1045 aaKnown RBP12.65□□□□□ -0.38
RNF13-201ENST00000344229 HSFX1Q9UBD0 423 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 LHX3Q9UBR4 397 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 STOML2Q9UJZ1 356 aa12.65□□□□□ -0.38
RNF13-201ENST00000344229 ARIH1Q9Y4X5 557 aaPredicted RBP12.65□□□□□ -0.38
RNF13-201ENST00000344229 CFLARO15519 480 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 RHOBTB1O94844 696 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 XRCC1P18887 633 aaPredicted RBP12.64□□□□□ -0.39
RNF13-201ENST00000344229 PRMT2P55345 433 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 SMAD3P84022 425 aaKnown RBP12.64□□□□□ -0.39
RNF13-201ENST00000344229 MS4A2Q01362 244 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 PLOD1Q02809 727 aaPredicted RBP12.64□□□□□ -0.39
RNF13-201ENST00000344229 IKBKEQ14164 716 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 TAF12Q16514 161 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 TPGS2Q68CL5 300 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 NCEH1Q6PIU2 408 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 C16orf89Q6UX73 402 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 ADGRG6Q86SQ4 1221 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 DHDDSQ86SQ9 333 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 SLC39A11Q8N1S5 342 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 EFHBQ8N7U6 833 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 PPFIBP2Q8ND30 876 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 EID2BQ96D98 161 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 FEM1AQ9BSK4 669 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 WDR41Q9HAD4 459 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 STK39Q9UEW8 545 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 PRPF19Q9UMS4 504 aaKnown RBP12.64□□□□□ -0.39
RNF13-201ENST00000344229 FNDC3AQ9Y2H6 1198 aaKnown RBP12.64□□□□□ -0.39
RNF13-201ENST00000344229 FCF1Q9Y324 198 aaKnown RBP12.64□□□□□ -0.39
RNF13-201ENST00000344229 OR51B4Q9Y5P0 310 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 K7ERQ8 282 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 FBP2O00757 339 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 PFDN1O60925 122 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 CDK14O94921 469 aa12.64□□□□□ -0.39
RNF13-201ENST00000344229 HSPA1AP0DMV8 641 aaKnown RBP12.64□□□□□ -0.39
RNF13-201ENST00000344229 HSPA1BP0DMV9 641 aaKnown RBP12.64□□□□□ -0.39
RNF13-201ENST00000344229 CBX3Q13185 183 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms