RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 PAGE2BQ5JRK9 111 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 LINGO4Q6UY18 593 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 MTSS1LQ765P7 747 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 SIAH1Q8IUQ4 282 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 LPGAT1Q92604 370 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 PAWRQ96IZ0 340 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 MYH8P13535 1937 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 MYH2Q9UKX2 1941 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 HTR3EA5X5Y0 456 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 KRT87PA6NCN2 255 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 YJEFN3A6XGL0 299 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 FGF1P05230 155 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 SMPD1P17405 629 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 NR4A1P22736 598 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 FEN1P39748 380 aaKnown RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 GPD2P43304 727 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 MAGEA10P43363 369 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 CXCR3P49682 368 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 LILRA4P59901 499 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 RPL26P61254 145 aaKnown RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 MOGSQ13724 837 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 PCBP1Q15365 356 aaKnown RBP eCLIP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 INSCQ1MX18 579 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 MSS51Q4VC12 460 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 FNDC3BQ53EP0 1204 aaKnown RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 BRMS1LQ5PSV4 323 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 ZNF549Q6P9A3 640 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 ZYG11AQ6WRX3 759 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 MON1AQ86VX9 555 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 NAT8LQ8N9F0 302 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 TADA1Q96BN2 335 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 SNX27Q96L92 541 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 AHSPQ9NZD4 102 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 KLHL3Q9UH77 587 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 SNX6Q9UNH7 406 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 BTBD19C9JJ37 291 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 HCRTO43612 131 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 RECQL5O94762 991 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 ALDH1A2O94788 518 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 CHRNGP07510 517 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 CYP2A6P11509 494 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 IDO1P14902 403 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 IL12AP29459 219 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 IST1P53990 364 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 KHDRBS2Q5VWX1 349 aaKnown RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 ZCCHC8Q6NZY4 707 aaKnown RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 DRICH1Q6PGQ1 229 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 XKR5Q6UX68 686 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 PPP3R2Q96LZ3 170 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 OR52E6Q96RD3 313 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 BBS4Q96RK4 519 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 CORO1BQ9BR76 489 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 OSBPL10Q9BXB5 764 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 MINDY3Q9H8M7 445 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 MRPL17Q9NRX2 175 aaKnown RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 FZD10Q9ULW2 581 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 GMPPBQ9Y5P6 360 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 SPEF2Q9C093 1822 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 SH3PXD2BA1X283 911 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 C9IYK1 514 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 CLDN25C9JDP6 229 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 TRAFD1O14545 582 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 ITM2AO43736 263 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 ZNF24P17028 368 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 EPORP19235 508 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 POLR2EP19388 210 aaKnown RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 GJA9P57773 515 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 ZNF423Q2M1K9 1284 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 SOWAHAQ2M3V2 549 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 XKR6Q5GH73 641 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 PPM1LQ5SGD2 360 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 OGFOD2Q6N063 350 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 NEK5Q6P3R8 708 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 LRRC49Q8IUZ0 686 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 SLC35B2Q8TB61 432 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 DCAKDQ8WVC6 231 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 LRTOMTQ8WZ04 291 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 ESAMQ96AP7 390 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 B3GALT6Q96L58 329 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 COQ10BQ9H8M1 238 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 RCOR3Q9P2K3 495 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 ATP6V1HQ9UI12 483 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 ZNF221Q9UK13 617 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 COL1A2P08123 1366 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 PPEF2O14830 753 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 OTCP00480 354 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 GM2AP17900 193 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 L1CAMP32004 1257 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 OR1D2P34982 312 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 SEPHS1P49903 392 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 AIF1P55008 147 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 BNIP2Q12982 314 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 TUSC3Q13454 348 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 OLIG2Q13516 323 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 PRKD1Q15139 912 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 SYPL2Q5VXT5 272 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 FBXL19Q6PCT2 694 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 PAOXQ6QHF9 649 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 EPHX4Q8IUS5 362 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms