RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CPNE9Q8IYJ1 553 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 OR13C4Q8NGS5 318 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 FUBP3Q96I24 572 aaKnown RBP eCLIP7.16□□□□□ -1.26
VCAN-202ENST00000342785 PANX1Q96RD7 426 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 MIPEPQ99797 713 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ZCCHC2Q9C0B9 1178 aaKnown RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 FKBPLQ9UIM3 349 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 DMTF1Q9Y222 760 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ARIH1Q9Y4X5 557 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 SLC22A2O15244 555 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 STK16O75716 305 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 SLC25A14O95258 325 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 GSNP06396 782 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 RBM20Q5T481 1227 aaKnown RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 REP15Q6BDI9 236 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 FBXL22Q6P050 247 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ERAP2Q6P179 960 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 SPATA19Q7Z5L4 167 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ZNF467Q7Z7K2 595 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 GALNT15Q8N3T1 639 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 CENPNQ96H22 339 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 B3GALT6Q96L58 329 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 C16orf70Q9BSU1 422 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 SYT17Q9BSW7 474 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ADAMTS5Q9UNA0 930 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 SNX8Q9Y5X2 465 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 U3KQV3 271 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 CCDC162PA2VCL2 907 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ARHGEF9O43307 516 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 STBD1O95210 358 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 LRATO95237 230 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 GSTM1P09488 218 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 CORO1AP31146 461 aaKnown RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 KRT20P35900 424 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 MAPKAPK2P49137 400 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 LSM3P62310 102 aaKnown RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 SP3Q02447 781 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 SMARCB1Q12824 385 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ITGADQ13349 1161 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 TRIP4Q15650 581 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 KCNA10Q16322 511 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ZCCHC8Q6NZY4 707 aaKnown RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 APOLD1Q96LR9 279 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ZNF558Q96NG5 402 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 COQ10BQ9H8M1 238 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ZDHHC2Q9UIJ5 367 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 DAPK2Q9UIK4 370 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 FAM72CH0Y354 149 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 RFXANKO14593 260 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 CAPN1P07384 714 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 OCM2P0CE71 109 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 OCMP0CE72 109 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 SOX4Q06945 474 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 DLG1Q12959 904 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 TP53BP2Q13625 1128 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 PLEKHG4Q58EX7 1191 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 FAM72AQ5TYM5 149 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 SMYD5Q6GMV2 418 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 FAM72DQ6L9T8 149 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ASRGL1Q7L266 308 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 DET1Q7L5Y6 550 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 FAM72BQ86X60 149 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 TRAPPC5Q8IUR0 188 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 OSBPL6Q9BZF3 934 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 RAD21L1Q9H4I0 556 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ZFYVE1Q9HBF4 777 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 PLGRKTQ9HBL7 147 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 KNL1Q8NG31 2342 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 SLC28A1O00337 649 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 SNAI1O95863 264 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 HERC3Q15034 1050 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 INO80DQ53TQ3 878 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 EPGNQ6UW88 154 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 TMEM130Q8N3G9 435 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ARFGAP1Q8N6T3 406 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 OR7A2PQ8NGA2 310 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 NAT14Q8WUY8 206 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ATL1Q8WXF7 558 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ROPN1LQ96C74 230 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ALG2Q9H553 416 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 EVLQ9UI08 416 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 TSC22D4Q9Y3Q8 395 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 GMPPBQ9Y5P6 360 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 A0A1B0GVM2 712 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 TCAF2A6NFQ2 919 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 CYP2A6P11509 494 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 OGNP20774 298 aaKnown RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 IMPDH1P20839 514 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 HSPA7P48741 367 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 RPS24P62847 133 aaKnown RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 IKBKEQ14164 716 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ACOX1Q15067 660 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 CWF19L1Q69YN2 538 aaKnown RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 PAQR3Q6TCH7 311 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 CYS1Q717R9 158 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 LEMD2Q8NC56 503 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 RNF208Q9H0X6 261 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 SMPD3Q9NY59 655 aaPredicted RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 PHRF1Q9P1Y6 1649 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms