RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 GLRBP48167 497 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 C1QTNF8P60827 252 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 CD47Q08722 323 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 UGP2Q16851 508 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 CDO1Q16878 200 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 DUOXA2Q1HG44 320 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 C5orf22Q49AR2 442 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-201ENST00000342245 SLC26A9Q7LBE3 791 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 VN1R5Q7Z5H4 357 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 ZDHHC13Q8IUH4 622 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 ST6GAL2Q96JF0 529 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 C2orf49Q9BVC5 232 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-201ENST00000342245 POLR3FQ9H1D9 316 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-201ENST00000342245 TRIM39Q9HCM9 518 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 GPATCH2LQ9NWQ4 482 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 OR5K3A6NET4 321 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 ZBBXA8MT70 800 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 SLC35E2BP0CK96 405 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 GSK3BP49841 420 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 GRM3Q14832 879 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 DPYSL2Q16555 572 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 OR9I1Q8NGQ6 314 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 TWNKQ96RR1 684 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 TRMOQ9BU70 441 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 ZC3H12CQ9C0D7 883 aaKnown RBP18.46■□□□□ 0.55
SMPD1-201ENST00000342245 HAPLN2Q9GZV7 340 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 POMKQ9H5K3 350 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 PAQR5Q9NXK6 330 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-201ENST00000342245 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-201ENST00000342245 GTF2IRD1Q9UHL9 959 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 TPRKBQ9Y3C4 175 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 SIPA1L1O43166 1804 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 METTL15A6NJ78 407 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 FXYD1O00168 92 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 PPEF1O14829 653 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-201ENST00000342245 MATN4O95460 622 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 PTGS2P35354 604 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 IFRD2Q12894 506 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-201ENST00000342245 PPP1R3AQ16821 1122 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 KIF19Q2TAC6 998 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 COLEC12Q5KU26 742 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 TSTD2Q5T7W7 516 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 CUZD1Q86UP6 607 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 STK32CQ86UX6 486 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 GATAD2AQ86YP4 633 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 CENPLQ8N0S6 344 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-201ENST00000342245 MIER2Q8N344 545 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 CADM2Q8N3J6 435 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 PIK3R3Q92569 461 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 TMBIM1Q969X1 311 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 TMEM125Q96AQ2 219 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 BIRC7Q96CA5 298 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 REXO5Q96IC2 774 aaKnown RBP18.45■□□□□ 0.54
SMPD1-201ENST00000342245 ALOXE3Q9BYJ1 711 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 IL1RL2Q9HB29 575 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 NTN4Q9HB63 628 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 AASDHPPTQ9NRN7 309 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 ACOXLQ9NUZ1 547 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 OPTCQ9UBM4 332 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 VANGL2Q9ULK5 521 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 SMCHD1A6NHR9 2005 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 HMX3A6NHT5 357 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 hCG_2039718K7EN88 272 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 POLRMTO00411 1230 aaKnown RBP18.45■□□□□ 0.54
SMPD1-201ENST00000342245 MICAL2O94851 1124 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 PCNAP12004 261 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 HTR1EP28566 365 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 LSM3P62310 102 aaKnown RBP18.45■□□□□ 0.54
SMPD1-201ENST00000342245 CTU2Q2VPK5 515 aaKnown RBP18.45■□□□□ 0.54
SMPD1-201ENST00000342245 TRMT1LQ7Z2T5 733 aaKnown RBP18.45■□□□□ 0.54
SMPD1-201ENST00000342245 ZNF438Q7Z4V0 828 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 SVOPLQ8N434 492 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 AMER2Q8N7J2 671 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 SETD6Q8TBK2 473 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 LRRN4Q8WUT4 740 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 CPB2Q96IY4 423 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 GJD4Q96KN9 370 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-201ENST00000342245 RNF145Q96MT1 663 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 APOL4Q9BPW4 351 aa18.45■□□□□ 0.54
SMPD1-201ENST00000342245 A0A087X1B8 175 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 PTGES3LE9PB15 166 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 LOC110117498-PIK3R3F6TDL0 507 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 ASNSP08243 561 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 MTHFD1P11586 935 aaKnown RBP18.44■□□□□ 0.54
SMPD1-201ENST00000342245 GLUD2P49448 558 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 NCS1P62166 190 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 GPLD1P80108 840 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 STARD3Q14849 445 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 TRAF7Q6Q0C0 670 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 NOXA1Q86UR1 476 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 OR5H6Q8NGV6 325 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 RBM4BQ9BQ04 359 aaKnown RBP18.44■□□□□ 0.54
SMPD1-201ENST00000342245 RBM4Q9BWF3 364 aaKnown RBP18.44■□□□□ 0.54
SMPD1-201ENST00000342245 NXF2Q9GZY0 626 aaKnown RBP18.44■□□□□ 0.54
SMPD1-201ENST00000342245 NGRNQ9NPE2 291 aaKnown RBP18.44■□□□□ 0.54
SMPD1-201ENST00000342245 ZMAT5Q9UDW3 170 aaKnown RBP18.44■□□□□ 0.54
SMPD1-201ENST00000342245 RAPGEFL1Q9UHV5 662 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 MAGED2Q9UNF1 606 aaPredicted RBP18.44■□□□□ 0.54
SMPD1-201ENST00000342245 FIS1Q9Y3D6 152 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms