RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CLCN4P51793 760 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 MTTPP55157 894 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 AP2B1P63010 937 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 PHEXP78562 749 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 PCLAFQ15004 111 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 NXNQ6DKJ4 435 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 CXorf57Q6NSI4 855 aaKnown RBP13.04□□□□□ -0.32
COL18A1-201ENST00000342220 MARK2Q7KZI7 788 aaKnown RBP13.04□□□□□ -0.32
COL18A1-201ENST00000342220 MAVSQ7Z434 540 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 FKBPLQ9UIM3 349 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 HEATR9A2RTY3 570 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 ERI2A8K979 691 aaKnown RBP13.03□□□□□ -0.32
COL18A1-201ENST00000342220 WASH3PC4AMC7 463 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 KPNA3O00505 521 aaPredicted RBP13.03□□□□□ -0.32
COL18A1-201ENST00000342220 NDUFS3O75489 264 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 ALDH1A2O94788 518 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 OR6B1O95007 311 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 UGT1A6P19224 532 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 AOC1P19801 751 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 UGT1A1P22309 533 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 UGT1A4P22310 534 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 UGT1A3P35503 534 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 UGT1A5P35504 534 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 SH3BGRP55822 239 aaPredicted RBP13.03□□□□□ -0.32
COL18A1-201ENST00000342220 BCL2L1Q07817 233 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 TBCCQ15814 346 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 STEAP4Q687X5 459 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 DENND5AQ6IQ26 1287 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 APOBEC2Q9Y235 224 aaKnown RBP13.03□□□□□ -0.32
COL18A1-201ENST00000342220 SPTBN5Q9NRC6 3674 aaKnown RBP13.03□□□□□ -0.32
COL18A1-201ENST00000342220 CCDC162PA2VCL2 907 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 DRGXA6NNA5 263 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 GLRA3O75311 464 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 GOT2P00505 430 aaKnown RBP13.03□□□□□ -0.32
COL18A1-201ENST00000342220 CNTFP26441 200 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 HLA-FP30511 346 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 CLCN2P51788 898 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 TAS2R39P59534 338 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 COL13A1Q5TAT6 717 aaPredicted RBP13.03□□□□□ -0.32
COL18A1-201ENST00000342220 KCTD11Q693B1 232 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 TRIM67Q6ZTA4 783 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 DET1Q7L5Y6 550 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 ZNF683Q8IZ20 524 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 ST13P4Q8IZP2 240 aaPredicted RBP13.03□□□□□ -0.32
COL18A1-201ENST00000342220 ARRDC2Q8TBH0 407 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 PYDC1Q8WXC3 89 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 MYRFLQ96LU7 910 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 GPAMQ9HCL2 828 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 MSRAQ9UJ68 235 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 RAD54BQ9Y620 910 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 COL4A6Q14031 1691 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 LINC01565O15544 149 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 SIN3BO75182 1162 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 PDE5AO76074 875 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 GLP2RO95838 553 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 NFKBIAP25963 317 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 HTRA4P83105 476 aaPredicted RBP13.03□□□□□ -0.32
COL18A1-201ENST00000342220 TRAF2Q12933 501 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 PEX6Q13608 980 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 CYTH1Q15438 398 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 RANBP10Q6VN20 620 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 ADAMTS19Q8TE59 1207 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 ESAMQ96AP7 390 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 C1orf21Q9H246 121 aa13.03□□□□□ -0.32
COL18A1-201ENST00000342220 GOLGA8QA0A0J9YX86 632 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 ILVBLA1L0T0 632 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 GOLGA8OA6NCC3 632 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 TBC1D3BA6NDS4 549 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 GOLGA8NF8WBI6 632 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 PLK4O00444 970 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 CLASP2O75122 1294 aaKnown RBP13.02□□□□□ -0.32
COL18A1-201ENST00000342220 MTX2O75431 263 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 PEX11BO96011 259 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 IGLV3-27P01718 113 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 STMN1P16949 149 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 TSTA3Q13630 321 aaPredicted RBP13.02□□□□□ -0.32
COL18A1-201ENST00000342220 PDPK2PQ6A1A2 396 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 NXNL1Q96CM4 212 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 ZFRQ96KR1 1074 aaKnown RBP13.02□□□□□ -0.32
COL18A1-201ENST00000342220 NSMCE3Q96MG7 304 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 PHF12Q96QT6 1004 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 SORT1Q99523 831 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 CPNE1Q99829 537 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 EIF2B3Q9NR50 452 aaKnown RBP13.02□□□□□ -0.32
COL18A1-201ENST00000342220 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.32
COL18A1-201ENST00000342220 GTSE1Q9NYZ3 720 aa13.02□□□□□ -0.32
COL18A1-201ENST00000342220 C2orf81A6NN90 581 aa13.02□□□□□ -0.33
COL18A1-201ENST00000342220 PSMD3O43242 534 aa13.02□□□□□ -0.33
COL18A1-201ENST00000342220 TRIM16O95361 564 aa13.02□□□□□ -0.33
COL18A1-201ENST00000342220 IDH3AP50213 366 aa13.02□□□□□ -0.33
COL18A1-201ENST00000342220 LRRC36Q1X8D7 754 aa13.02□□□□□ -0.33
COL18A1-201ENST00000342220 PLEKHG6Q3KR16 790 aa13.02□□□□□ -0.33
COL18A1-201ENST00000342220 MPPE1Q53F39 396 aa13.02□□□□□ -0.33
COL18A1-201ENST00000342220 LYSMD3Q7Z3D4 306 aa13.02□□□□□ -0.33
COL18A1-201ENST00000342220 CLDN19Q8N6F1 224 aa13.02□□□□□ -0.33
COL18A1-201ENST00000342220 DCBLD1Q8N8Z6 715 aa13.02□□□□□ -0.33
COL18A1-201ENST00000342220 CCDC124Q96CT7 223 aaKnown RBP13.02□□□□□ -0.33
COL18A1-201ENST00000342220 ECSITQ9BQ95 431 aa13.02□□□□□ -0.33
COL18A1-201ENST00000342220 E5RI56 91 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms