RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 SRP54P61011 504 aaKnown RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 DAG1Q14118 895 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 HERC3Q15034 1050 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 PIGGQ5H8A4 983 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 TMEM236Q5W0B7 351 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 MAP1SQ66K74 1059 aaPredicted RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 OR52E6Q96RD3 313 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 BPIFA1Q9NP55 256 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 DYRK4Q9NR20 520 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 UXTQ9UBK9 157 aaPredicted RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 CYTH4Q9UIA0 394 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 LRIG2O94898 1065 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 HOXC6P09630 235 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 IFNA8P32881 189 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 IST1P53990 364 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 NCBP2-AS2Q69YL0 99 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 PIWIL3Q7Z3Z3 882 aaKnown RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 PNPT1Q8TCS8 783 aaKnown RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 LRRC58Q96CX6 371 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 TSSK3Q96PN8 268 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 YIPF2Q9BWQ6 316 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 LRRC37A3O60309 1634 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 A0A1B0GTW7 788 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 ZNF99A8MXY4 864 aaPredicted RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 RAMP2O60895 175 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 ENO2P09104 434 aaPredicted RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 GSTM1P09488 218 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 HNRNPDQ14103 355 aaKnown RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 NCF4Q15080 339 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 NEK5Q6P3R8 708 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 TMEM132CQ8N3T6 1108 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 SMG8Q8ND04 991 aaKnown RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 FAM45AQ8TCE6 357 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 ROPN1LQ96C74 230 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 CBX4O00257 560 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 B4GAT1O43505 415 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 OXSR1O95747 527 aaPredicted RBP12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 C1DQ13901 141 aaKnown RBP12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 ZC3HC1Q86WB0 502 aaKnown RBP12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 PROSER1Q86XN7 944 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 CLIP4Q8N3C7 705 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 GAD1Q99259 594 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 SEMA3CQ99985 751 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 GPBP1L1Q9HC44 474 aaPredicted RBP12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 RAPGEFL1Q9UHV5 662 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 CARD8Q9Y2G2 431 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 OR51F1A6NGY5 319 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 CD3EAPO15446 510 aaKnown RBP12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 XPNPEP2O43895 674 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 KRT6AP02538 564 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 KRT6BP04259 564 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 TGFB3P10600 412 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 KRT6CP48668 564 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 SLC16A1P53985 500 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 PSMD5Q16401 504 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 RBM20Q5T481 1227 aaKnown RBP12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 STXBP5Q5T5C0 1151 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 GPR180Q86V85 440 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 ANKRD46Q86W74 232 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 UNC93AQ86WB7 457 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 METTL25Q8N6Q8 603 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 PIK3C3Q8NEB9 887 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 GJD4Q96KN9 370 aaPredicted RBP12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 TMCC3Q9ULS5 477 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 ARFGEF2Q9Y6D5 1785 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 SLC12A8A0AV02 714 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 A8MT66 165 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 HCRTO43612 131 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 ZBTB48P10074 688 aaPredicted RBP12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 CD36P16671 472 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 OR1E1P30953 314 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 CPOXP36551 454 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 GALNT3Q14435 633 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 SLC27A1Q6PCB7 646 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 NAA50Q9GZZ1 169 aaKnown RBP12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 MAGEE1Q9HCI5 957 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 GDAP2Q9NXN4 497 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 VPS9D1Q9Y2B5 631 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 NPHS1O60500 1241 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 NFATC3Q12968 1075 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 DPYSL2Q16555 572 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 NOMO2Q5JPE7 1267 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 GLT6D1Q7Z4J2 308 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 PNPLA1Q8N8W4 532 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 DNERQ8NFT8 737 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 KAT8Q9H7Z6 458 aaKnown RBP12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 TOR4AQ9NXH8 423 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 PDP1Q9P0J1 537 aaPredicted RBP12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 SLC2A6Q9UGQ3 507 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
SSX2IP-201ENST00000342203 SDHDO14521 159 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 SERPIND1P05546 499 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 PAX3P23760 479 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 MZF1P28698 734 aaPredicted RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 MXD1Q05195 221 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 UGT3A1Q6NUS8 523 aa12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 FCRL3Q96P31 734 aaPredicted RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 RBM4BQ9BQ04 359 aaKnown RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 RBM4Q9BWF3 364 aaKnown RBP12.47□□□□□ -0.41
SSX2IP-201ENST00000342203 SPATC1LQ9H0A9 340 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms