RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 BATF3Q9NR55 127 aa19.53■□□□□ 0.72
SEMA6C-201ENST00000341697 ATP6AP2A0A1C7CYW4 349 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 RGSL1A5PLK6 1076 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 NDUFB5O43674 189 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 ATP6AP2O75787 350 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 PTGER3P43115 390 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 TXNRD3NBQ6F5E7 133 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 LTBP4Q8N2S1 1624 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 COX4I1P13073 169 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 TCF4P15884 667 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 OGNP20774 298 aaKnown RBP19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 ITPKAP23677 461 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 PKNOX1P55347 436 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 RUNX1T1Q06455 604 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 ZNHIT3Q15649 155 aaPredicted RBP19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 BHLHB9Q6PI77 547 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 R3HCC1LQ7Z5L2 792 aaKnown RBP19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 NPY6RQ99463 290 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 TRMT61BQ9BVS5 477 aaKnown RBP19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 COPG2Q9UBF2 871 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 AGRPO00253 132 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 METTL18O95568 372 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 ESR1P03372 595 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 KIAA0930Q6ICG6 404 aaPredicted RBP19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 IYDQ6PHW0 289 aa19.52■□□□□ 0.72
SEMA6C-201ENST00000341697 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.52■□□□□ 0.71
SEMA6C-201ENST00000341697 PITPNM1O00562 1244 aa19.52■□□□□ 0.71
SEMA6C-201ENST00000341697 VIPP01282 170 aa19.52■□□□□ 0.71
SEMA6C-201ENST00000341697 GTF2E2P29084 291 aaKnown RBP19.52■□□□□ 0.71
SEMA6C-201ENST00000341697 STK16O75716 305 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 IDO1P14902 403 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 CDH5P33151 784 aaPredicted RBP19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 MRPS35P82673 323 aaKnown RBP19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 MSANTD2Q6P1R3 559 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 CHSY3Q70JA7 882 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 GPR180Q86V85 440 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 TM4SF4P48230 202 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 ILF3Q12906 894 aaKnown RBP eCLIP19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 MICU2Q8IYU8 434 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 C1orf50Q9BV19 199 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 INTS7Q9NVH2 962 aaKnown RBP19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 RBM47A0AV96 593 aaKnown RBP19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 EDF1O60869 148 aaKnown RBP19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 HLA-DQB2P05538 268 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 SERPINA6P08185 405 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 OGDHQ02218 1023 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 SLC25A11Q02978 314 aaKnown RBP19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 SOX4Q06945 474 aaPredicted RBP19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 GRASPQ7Z6J2 395 aaPredicted RBP19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 CFAP206Q8IYR0 622 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 CYP4X1Q8N118 509 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 RP9Q8TA86 221 aaKnown RBP19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 OVCA2Q8WZ82 227 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 AIF1LQ9BQI0 150 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 SUV39H2Q9H5I1 410 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 IL23AQ9NPF7 189 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 GULP1Q9UBP9 304 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 COLEC10Q9Y6Z7 277 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 EPORP19235 508 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 SLC10A7Q0GE19 358 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 AHI1Q8N157 1196 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 LMO3Q8TAP4 145 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 PNPOQ9NVS9 261 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 GRHL1Q9NZI5 618 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 NUDT4Q9NZJ9 180 aa19.51■□□□□ 0.71
SEMA6C-201ENST00000341697 KPNB1Q14974 876 aaKnown RBP19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 ACAP2Q15057 778 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 PPM1JQ5JR12 505 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 FSTL4Q6MZW2 842 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 BPIFB1Q8TDL5 484 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 DDX1Q92499 740 aaKnown RBP19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 SPOCK2Q92563 424 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 TMEM109Q9BVC6 243 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 RECQL5O94762 991 aaPredicted RBP19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 RASGRP1O95267 797 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 NUDT14O95848 222 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 RPIAP49247 311 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 TEAD2Q15562 447 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 SAMD11Q96NU1 681 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 GNEQ9Y223 722 aaKnown RBP19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 KLHL20Q9Y2M5 609 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 GABRDO14764 452 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 OR10H2O60403 315 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 DRD4P21917 467 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 NSG1P42857 185 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 GHRHRQ02643 423 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 USP4Q13107 963 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 SF1Q15637 639 aaKnown RBP19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 OR6Y1Q8NGX8 325 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 NELL1Q92832 810 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 POLR3BQ9NW08 1133 aaPredicted RBP19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 GLI3P10071 1580 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 M0R3G1 203 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 CNPP09543 421 aaKnown RBP19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 IMPDH2P12268 514 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 ATP6V1B1P15313 513 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 CCDC85BQ15834 202 aaPredicted RBP19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 EML3Q32P44 896 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 HDDC3Q8N4P3 179 aa19.5■□□□□ 0.71
SEMA6C-201ENST00000341697 AARSD1Q9BTE6 412 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms