RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 GALNT3Q14435 633 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 SLC30A9Q6PML9 568 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 MARK2Q7KZI7 788 aaKnown RBP20.04■□□□□ 0.8
SYNE2-201ENST00000341472 TRIM74Q86UV6 250 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 C17orf82Q86X59 251 aaPredicted RBP20.04■□□□□ 0.8
SYNE2-201ENST00000341472 KATNAL2Q8IYT4 538 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 ARL14Q8N4G2 192 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 TFB1MQ8WVM0 346 aaKnown RBP20.04■□□□□ 0.8
SYNE2-201ENST00000341472 MRFAP1L1Q96HT8 127 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 COX14Q96I36 57 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 TEKT5Q96M29 485 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 TMEM74Q96NL1 305 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 OR2M4Q96R27 311 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 GOLPH3Q9H4A6 298 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 ZFYVE1Q9HBF4 777 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 ASCL3Q9NQ33 180 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 CNOT6Q9ULM6 557 aaKnown RBP20.04■□□□□ 0.8
SYNE2-201ENST00000341472 TFR2Q9UP52 801 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.04■□□□□ 0.8
SYNE2-201ENST00000341472 PLEKHM1Q9Y4G2 1056 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 RHPN2P1A8MT19 583 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 ZW10O43264 779 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 TNFSF15O95150 251 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 ECEL1O95672 775 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 PDX1P52945 283 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 MAZP56270 477 aaKnown RBP20.03■□□□□ 0.8
SYNE2-201ENST00000341472 PYCR3Q53H96 274 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 B3GNT8Q7Z7M8 397 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 GAS2L3Q86XJ1 694 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 GALNT13Q8IUC8 556 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 TMTC1Q8IUR5 882 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 P3H4Q92791 437 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 TADA1Q96BN2 335 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 CRELD1Q96HD1 420 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 PRR11Q96HE9 360 aaPredicted RBP20.03■□□□□ 0.8
SYNE2-201ENST00000341472 NAF1Q96HR8 494 aaKnown RBP20.03■□□□□ 0.8
SYNE2-201ENST00000341472 TRIB3Q96RU7 358 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 WDR24Q96S15 920 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 FOXP3Q9BZS1 431 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 CDH19Q9H159 772 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 MAGEE1Q9HCI5 957 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 EPB41L5Q9HCM4 733 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 ZNHIT2Q9UHR6 403 aa20.03■□□□□ 0.8
SYNE2-201ENST00000341472 D6RAR5 112 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 MTSS1O43312 755 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 B4GAT1O43505 415 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 PTPN3P26045 913 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 ACTR1BP42025 376 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 MLLT3P42568 568 aaPredicted RBP20.02■□□□□ 0.8
SYNE2-201ENST00000341472 ACTR1AP61163 376 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 B4GALNT1Q00973 533 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 EIF3IQ13347 325 aaKnown RBP20.02■□□□□ 0.8
SYNE2-201ENST00000341472 PRKD1Q15139 912 aaPredicted RBP20.02■□□□□ 0.8
SYNE2-201ENST00000341472 SLC14A2Q15849 920 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 PCSK7Q16549 785 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 TFDP3Q5H9I0 405 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 C11orf63Q6NUN7 778 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 LYSMD3Q7Z3D4 306 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 SPRED1Q7Z699 444 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 SPACA3Q8IXA5 215 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 FBXO39Q8N4B4 442 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 SPATA22Q8NHS9 363 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 LIN37Q96GY3 246 aaPredicted RBP20.02■□□□□ 0.8
SYNE2-201ENST00000341472 ATXN7L1Q9ULK2 861 aaPredicted RBP20.02■□□□□ 0.8
SYNE2-201ENST00000341472 SHOC2Q9UQ13 582 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 ST14Q9Y5Y6 855 aa20.02■□□□□ 0.8
SYNE2-201ENST00000341472 RP1P56715 2156 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 PMPCBO75439 489 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 NDUFA10O95299 355 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 IPO7O95373 1038 aaKnown RBP20.01■□□□□ 0.79
SYNE2-201ENST00000341472 NDST3O95803 873 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 PECAM1P16284 738 aaPredicted RBP20.01■□□□□ 0.79
SYNE2-201ENST00000341472 ALDH4A1P30038 563 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 CCKBRP32239 447 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 OR1D5P58170 312 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 TLE3Q04726 772 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 ADCY2Q08462 1091 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 HENMT1Q5T8I9 393 aaKnown RBP20.01■□□□□ 0.79
SYNE2-201ENST00000341472 RAB11FIP2Q7L804 512 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 TMC3Q7Z5M5 1100 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 DAAM2Q86T65 1068 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 CCDC50Q8IVM0 306 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 RBM41Q96IZ5 413 aaKnown RBP20.01■□□□□ 0.79
SYNE2-201ENST00000341472 CALR3Q96L12 384 aaKnown RBP20.01■□□□□ 0.79
SYNE2-201ENST00000341472 SRPK1Q96SB4 655 aaKnown RBP20.01■□□□□ 0.79
SYNE2-201ENST00000341472 GPR63Q9BZJ6 419 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 PRORYQ9H606 182 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 RAD18Q9NS91 495 aa20.01■□□□□ 0.79
SYNE2-201ENST00000341472 hCG_1818297A0A087WSY0 165 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 PMS2P1A4D2B8 440 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 PLD2O14939 933 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 MT-CYBP00156 380 aaPredicted RBP20■□□□□ 0.79
SYNE2-201ENST00000341472 ATP1A1P05023 1023 aaKnown RBP20■□□□□ 0.79
SYNE2-201ENST00000341472 PIRTP0C851 137 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 NAP1L1P55209 391 aaKnown RBP20■□□□□ 0.79
SYNE2-201ENST00000341472 ZFP36L1Q07352 338 aaKnown RBP20■□□□□ 0.79
SYNE2-201ENST00000341472 WASHC5Q12768 1159 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 LRP8Q14114 963 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 AMZ1Q400G9 498 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 USP53Q70EK8 1073 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms