RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CHRNA4P43681 627 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 LMAN1P49257 510 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 CCDC173Q0VFZ6 552 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 ILF3Q12906 894 aaKnown RBP eCLIP19.08■□□□□ 0.64
SYNE4-202ENST00000340477 SNX1Q13596 522 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 TCEA2Q15560 299 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 OASLQ15646 514 aaKnown RBP19.08■□□□□ 0.64
SYNE4-202ENST00000340477 CCNG2Q16589 344 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 C6orf132Q5T0Z8 1188 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 TAF8Q7Z7C8 310 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 SLCO6A1Q86UG4 719 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 REXO1L1PQ8IX06 675 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 TRAM1L1Q8N609 369 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 PNPLA1Q8N8W4 532 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 FAM181AQ8N9Y4 354 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 PBKQ96KB5 322 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 APOLD1Q96LR9 279 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 PLEKHG4BQ96PX9 1271 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 NAP1L3Q99457 506 aaPredicted RBP19.08■□□□□ 0.64
SYNE4-202ENST00000340477 FRMD8Q9BZ67 464 aaPredicted RBP19.08■□□□□ 0.64
SYNE4-202ENST00000340477 MRPL40Q9NQ50 206 aaKnown RBP19.08■□□□□ 0.64
SYNE4-202ENST00000340477 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.08■□□□□ 0.64
SYNE4-202ENST00000340477 PNMA8BQ9ULN7 279 aaPredicted RBP19.08■□□□□ 0.64
SYNE4-202ENST00000340477 SPO11Q9Y5K1 396 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 C2orf81A6NN90 581 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 E7EVH7 732 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 PPFIA2O75334 1257 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 SOD1P00441 154 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 CEACAM5P06731 702 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 IVLP07476 585 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 CKMT1AP12532 417 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 ACP1P24666 158 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 CXCR5P32302 372 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 GNPDA1P46926 289 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 ACADVLP49748 655 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 GDF10P55107 478 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 PDE1BQ01064 536 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 NR0B2Q15466 257 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 GSTA5Q7RTV2 222 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 RAB44Q7Z6P3 723 aaPredicted RBP19.07■□□□□ 0.64
SYNE4-202ENST00000340477 GALNT13Q8IUC8 556 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 GALNT15Q8N3T1 639 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 RTP4Q96DX8 246 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 AGAP2Q99490 1192 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 APOL2Q9BQE5 337 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 GORASP1Q9BQQ3 440 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 GSDMCQ9BYG8 508 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 TOR4AQ9NXH8 423 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 SLC17A4Q9Y2C5 497 aa19.07■□□□□ 0.64
SYNE4-202ENST00000340477 ERI2A8K979 691 aaKnown RBP19.06■□□□□ 0.64
SYNE4-202ENST00000340477 YY2O15391 372 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 STX7O15400 261 aaKnown RBP19.06■□□□□ 0.64
SYNE4-202ENST00000340477 HYAL3O43820 417 aaPredicted RBP19.06■□□□□ 0.64
SYNE4-202ENST00000340477 CRTAMO95727 393 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 GIMD1P0DJR0 217 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 ADRA1AP35348 466 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 FDFT1P37268 417 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 SPAM1P38567 509 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 SHC2P98077 582 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 RANBP10Q6VN20 620 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 LINC00523Q86TU6 105 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 TRIM74Q86UV6 250 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 PHYKPLQ8IUZ5 450 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 SLC35F6Q8N357 371 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 CHCHD4Q8N4Q1 142 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 GPR26Q8NDV2 337 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 COX14Q96I36 57 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 CLPBQ9H078 707 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 CAAP1Q9H8G2 361 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 BPIFA1Q9NP55 256 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 TRNAU1APQ9NX07 287 aaKnown RBP19.06■□□□□ 0.64
SYNE4-202ENST00000340477 VPS18Q9P253 973 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 PAK5Q9P286 719 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 SUFUQ9UMX1 484 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 GPR34Q9UPC5 381 aa19.06■□□□□ 0.64
SYNE4-202ENST00000340477 GOLGA4Q13439 2230 aaKnown RBP19.06■□□□□ 0.64
SYNE4-202ENST00000340477 FADS2P1A8MWK0 482 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 AURKAO14965 403 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 GAS8O95995 478 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 BPIP17213 487 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 E2F1Q01094 437 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 TAF1AQ15573 450 aaPredicted RBP19.05■□□□□ 0.64
SYNE4-202ENST00000340477 DRICH1Q6PGQ1 229 aaPredicted RBP19.05■□□□□ 0.64
SYNE4-202ENST00000340477 C4orf22Q6V702 233 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 TTC30BQ8N4P2 665 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 ARL10Q8N8L6 244 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 NAT6Q93015 286 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 EID2BQ96D98 161 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 OR2M4Q96R27 311 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 SCNM1Q9BWG6 230 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 BOCQ9BWV1 1114 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 TMEM168Q9H0V1 697 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 RMI1Q9H9A7 625 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 TMEM98Q9Y2Y6 226 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 GPSM3Q9Y4H4 160 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 NEUROG3Q9Y4Z2 214 aa19.05■□□□□ 0.64
SYNE4-202ENST00000340477 USP12O75317 370 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 DKK1O94907 266 aa19.04■□□□□ 0.64
SYNE4-202ENST00000340477 SLC25A14O95258 325 aaPredicted RBP19.04■□□□□ 0.64
SYNE4-202ENST00000340477 METTL18O95568 372 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms