RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ELK4P28324 431 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 GSK3BP49841 420 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 CDKN1CP49918 316 aaPredicted RBP14.35□□□□□ -0.11
CPSF7-201ENST00000340437 TBX4P57082 545 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 SGO1Q5FBB7 561 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 FGD3Q5JSP0 725 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 PPP4R4Q6NUP7 873 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 SCD5Q86SK9 330 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 FNDC5Q8NAU1 212 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 TUBB1Q9H4B7 451 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 ALG2Q9H553 416 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 LTB4R2Q9NPC1 389 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 INTS7Q9NVH2 962 aaKnown RBP14.35□□□□□ -0.11
CPSF7-201ENST00000340437 GALPQ9UBC7 116 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 SUN2Q9UH99 717 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 SDK1Q7Z5N4 2213 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 MYADML2A6NDP7 307 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 MAN1A2O60476 641 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 NOL3O60936 208 aaKnown RBP14.34□□□□□ -0.11
CPSF7-201ENST00000340437 SLC6A2P23975 617 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 OR1E1P30953 314 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 PIGFQ07326 219 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 ZNF549Q6P9A3 640 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 KDELC1Q6UW63 502 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 KCTD8Q6ZWB6 473 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 LZTR1Q8N653 840 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 BPIFB6Q8NFQ5 453 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 CCDC90BQ9GZT6 254 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 SLC27A5Q9Y2P5 690 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 FGF10O15520 208 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-201ENST00000340437 KCNH1O95259 989 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 PARNO95453 639 aaKnown RBP14.34□□□□□ -0.11
CPSF7-201ENST00000340437 CD1DP15813 335 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 MAP4P27816 1152 aaKnown RBP14.34□□□□□ -0.11
CPSF7-201ENST00000340437 NRG1Q02297 640 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-201ENST00000340437 CLCQ05315 142 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 POLD3Q15054 466 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-201ENST00000340437 C10orf120Q5SQS8 335 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 DUS1LQ6P1R4 473 aaKnown RBP14.34□□□□□ -0.11
CPSF7-201ENST00000340437 STK32CQ86UX6 486 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 UBXN10Q96LJ8 280 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 PLEKHG4BQ96PX9 1271 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 NACA2Q9H009 215 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 CCM2LQ9NUG4 571 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-201ENST00000340437 CD274Q9NZQ7 290 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 LAMA2P24043 3122 aaKnown RBP14.34□□□□□ -0.11
CPSF7-201ENST00000340437 LAMA3Q16787 3333 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 CCDC154A6NI56 674 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 NDUFS3O75489 264 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 IST1P53990 364 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 MTPNP58546 118 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 CTBSQ01459 385 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 XKR4Q5GH76 650 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 OGFOD2Q6N063 350 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 LIMS2Q7Z4I7 341 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 ATAD1Q8NBU5 361 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 IGSF8Q969P0 613 aa14.34□□□□□ -0.11
CPSF7-201ENST00000340437 NOL6Q9H6R4 1146 aaKnown RBP14.34□□□□□ -0.11
CPSF7-201ENST00000340437 GPR39O43194 453 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 SYNCRIPO60506 623 aaKnown RBP14.33□□□□□ -0.12
CPSF7-201ENST00000340437 CSRP3P50461 194 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 UPP1Q16831 310 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 FAM45BPQ6NSW5 357 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 MRNIPQ6NTE8 343 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 UGT3A1Q6NUS8 523 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 SLC2A7Q6PXP3 512 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 OR10Q1Q8NGQ4 319 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 FAM45AQ8TCE6 357 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 TBCDQ9BTW9 1192 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 HGH1Q9BTY7 390 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 C9orf16Q9BUW7 83 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 ANKRD60Q9BZ19 345 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 EXD2Q9NVH0 621 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 ZMYM5Q9UJ78 669 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 SLC12A8A0AV02 714 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 GNGT2O14610 69 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 CD247P20963 164 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 MLLT6P55198 1093 aaPredicted RBP14.33□□□□□ -0.12
CPSF7-201ENST00000340437 FSCN1Q16658 493 aaKnown RBP14.33□□□□□ -0.12
CPSF7-201ENST00000340437 IMPG1Q17R60 797 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 KIAA0408Q6ZU52 694 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 TTC9BQ8N6N2 239 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 FBXO30Q8TB52 745 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 GPR21Q99679 349 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 ZFYVE28Q9HCC9 887 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 GMIPQ9P107 970 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 C1orf232A0A0U1RR37 186 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 IQCF5A8MTL0 148 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 TNPO2O14787 897 aaKnown RBP14.33□□□□□ -0.12
CPSF7-201ENST00000340437 SNX2O60749 519 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 ZNF182P17025 639 aaPredicted RBP14.33□□□□□ -0.12
CPSF7-201ENST00000340437 CLCN2P51788 898 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 DGKQP52824 942 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 EMP3P54852 163 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 LAPTM5Q13571 262 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 C18orf21Q32NC0 220 aaPredicted RBP14.33□□□□□ -0.12
CPSF7-201ENST00000340437 UGT3A2Q3SY77 523 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 TAS2R42Q7RTR8 314 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 FIG4Q92562 907 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 TMEM165Q9HC07 324 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms