RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 AP2A1O95782 977 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 TNFP01375 233 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 GIMD1P0DJR0 217 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 TCP1P17987 556 aaKnown RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 RPL22P35268 128 aaKnown RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 FDFT1P37268 417 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 DCDC1P59894 354 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 MSLNQ13421 630 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 C1orf61Q13536 156 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 TCEA2Q15560 299 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 TRIM74Q86UV6 250 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 LMX1AQ8TE12 382 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 MAGOHBQ96A72 148 aaKnown RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 COX14Q96I36 57 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 HIC2Q96JB3 615 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 CDC6Q99741 560 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 NAPGQ99747 312 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 SPATA16Q9BXB7 569 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 FRMD8Q9BZ67 464 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 ARNT2Q9HBZ2 717 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 CYP4F12Q9HCS2 524 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 RAB6BQ9NRW1 208 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 RAD18Q9NS91 495 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 IL17CQ9P0M4 197 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 PAK5Q9P286 719 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 NFKBIL1Q9UBC1 381 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 SPASTQ9UBP0 616 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 MOSPD1Q9UJG1 213 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 CNOT6Q9ULM6 557 aaKnown RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 ARL5AQ9Y689 179 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 DGKBQ9Y6T7 804 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 PTPRBP23467 1997 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 PRSS38A1L453 326 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 NEMP2A6NFY4 417 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 TRIM38O00635 465 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 FANCGO15287 622 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 CEACAM5P06731 702 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 CELA2BP08218 269 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-201ENST00000340074 CTSEP14091 401 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 POLD2P49005 469 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 SIM1P81133 766 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-201ENST00000340074 CYP1B1Q16678 543 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 PAPD7Q5XG87 772 aaKnown RBP15.16■□□□□ 0.02
UBE3B-201ENST00000340074 TTC27Q6P3X3 843 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 DOK6Q6PKX4 331 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 GLRX5Q86SX6 157 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 OR4C6Q8NH72 309 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 BRSK1Q8TDC3 778 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 ZSCAN5AQ9BUG6 496 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 CLPBQ9H078 707 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 CDH19Q9H159 772 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 PIH1D1Q9NWS0 290 aaKnown RBP15.16■□□□□ 0.02
UBE3B-201ENST00000340074 FTSJ1Q9UET6 329 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 FEZ2Q9UHY8 353 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-201ENST00000340074 TMEM98Q9Y2Y6 226 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 PKP3Q9Y446 797 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 CSNK1G3Q9Y6M4 447 aa15.16■□□□□ 0.02
UBE3B-201ENST00000340074 CTAGE9A4FU28 777 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 ERI2A8K979 691 aaKnown RBP15.15■□□□□ 0.02
UBE3B-201ENST00000340074 E7EVH7 732 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 SIGLEC6O43699 453 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 FUCA1P04066 466 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 LMAN1P49257 510 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 SEMA5AQ13591 1074 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 PTPRCAPQ14761 206 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 TAF1AQ15573 450 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-201ENST00000340074 DEFB133Q30KQ1 61 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 N4BP2L1Q5TBK1 243 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-201ENST00000340074 ERMP1Q7Z2K6 904 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 LINC00523Q86TU6 105 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 TRAM1L1Q8N609 369 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 PTCD2Q8WV60 388 aaKnown RBP15.15■□□□□ 0.02
UBE3B-201ENST00000340074 CNDP2Q96KP4 475 aaKnown RBP15.15■□□□□ 0.02
UBE3B-201ENST00000340074 CAPZA3Q96KX2 299 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 TBATAQ96M53 351 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 PLEKHG4BQ96PX9 1271 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 SUDS3Q9H7L9 328 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-201ENST00000340074 NLGN3Q9NZ94 848 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.15■□□□□ 0.02
UBE3B-201ENST00000340074 SUFUQ9UMX1 484 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 SLC17A4Q9Y2C5 497 aa15.15■□□□□ 0.02
UBE3B-201ENST00000340074 C2orf81A6NN90 581 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 STX7O15400 261 aaKnown RBP15.14■□□□□ 0.01
UBE3B-201ENST00000340074 TNFSF14O43557 240 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 LDOC1O95751 146 aaPredicted RBP15.14■□□□□ 0.01
UBE3B-201ENST00000340074 APRTP07741 180 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 ALPPL2P10696 532 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 TPH1P17752 444 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 LPOP22079 712 aaPredicted RBP15.14■□□□□ 0.01
UBE3B-201ENST00000340074 COILP38432 576 aaPredicted RBP15.14■□□□□ 0.01
UBE3B-201ENST00000340074 ELOCQ15369 112 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 HS1BP3Q53T59 392 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 ZDHHC20Q5W0Z9 365 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 CCDC137Q6PK04 289 aaKnown RBP15.14■□□□□ 0.01
UBE3B-201ENST00000340074 OR52K1Q8NGK4 314 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 DUSP23Q9BVJ7 150 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 TMEM168Q9H0V1 697 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 CARS2Q9HA77 564 aaKnown RBP15.14■□□□□ 0.01
UBE3B-201ENST00000340074 ARFGAP3Q9NP61 516 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 IL26Q9NPH9 171 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms