RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 SMARCB1Q12824 385 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 MPP3Q13368 585 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 ART3Q13508 389 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 SLC12A1Q13621 1099 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 CCINQ13939 588 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 FLOT2Q14254 428 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 DDR2Q16832 855 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 GRAMD1BQ3KR37 738 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 LSM12Q3MHD2 195 aaKnown RBP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 PRSS36Q5K4E3 855 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 LPCAT4Q643R3 524 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 KCTD11Q693B1 232 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 NAPEPLDQ6IQ20 393 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 FSTL4Q6MZW2 842 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 CHSY3Q70JA7 882 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 PID1Q7Z2X4 250 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 MAVSQ7Z434 540 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 DNAJB7Q7Z6W7 309 aaPredicted RBP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 STRA8Q7Z7C7 330 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 GALNT7Q86SF2 657 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 SPATA24Q86W54 205 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 HPS6Q86YV9 775 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 TMC8Q8IU68 726 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 SPATA2LQ8IUW3 424 aaPredicted RBP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 ERI1Q8IV48 349 aaKnown RBP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 CNTN4Q8IWV2 1026 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 GJD3Q8N144 294 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 ZNF567Q8N184 647 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 C12orf29Q8N999 325 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 RNF139Q8WU17 664 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 C2orf15Q8WU43 125 aaKnown RBP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 STYXQ8WUJ0 223 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 NANOS1Q8WY41 292 aaKnown RBP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 ING5Q8WYH8 240 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 DCUN1D1Q96GG9 259 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 FUBP3Q96I24 572 aaKnown RBP eCLIP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 MAELQ96JY0 434 aaKnown RBP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 DMRTB1Q96MA1 342 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 CATSPER2Q96P56 530 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 SLC2A13Q96QE2 648 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 CDRT15Q96T59 188 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 NPY6RQ99463 290 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 GPR22Q99680 433 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 TRIM56Q9BRZ2 755 aaKnown RBP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 TRMOQ9BU70 441 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 KIFC1Q9BW19 673 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 DUSP16Q9BY84 665 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 MRPL1Q9BYD6 325 aaKnown RBP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 SLC2A11Q9BYW1 496 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 RHOJQ9H4E5 214 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 VPS45Q9NRW7 570 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 FAM49BQ9NUQ9 324 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 HSFX1Q9UBD0 423 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 IPO11Q9UI26 975 aaKnown RBP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 RIMS3Q9UJD0 308 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 VANGL2Q9ULK5 521 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 RUVBL2Q9Y230 463 aaKnown RBP6.36□□□□□ -1.39
ZNF28-201ENST00000339844 CDYLQ9Y232 598 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 AK5Q9Y6K8 562 aa6.36□□□□□ -1.39
ZNF28-201ENST00000339844 PTPRDP23468 1912 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 A0A087X1B8 175 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 C15orf38-AP3S2A0A0A6YYH1 394 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 TRIM64CA6NLI5 447 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 EIF4E1BA6NMX2 242 aaKnown RBP6.35□□□□□ -1.39
ZNF28-201ENST00000339844 SLC38A8A6NNN8 435 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 TARM1B6A8C7 271 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 H3BM21 787 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 EEF2KO00418 725 aaKnown RBP6.35□□□□□ -1.39
ZNF28-201ENST00000339844 ACOT8O14734 319 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 TERTO14746 1132 aaKnown RBP6.35□□□□□ -1.39
ZNF28-201ENST00000339844 GRID2O43424 1007 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 ZBTB14O43829 449 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 GRAP2O75791 330 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 BEST1O76090 585 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 STAMBPO95630 424 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 ASGR2P07307 311 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 SMIM18P0DKX4 95 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 HMGA1P17096 107 aaKnown RBP6.35□□□□□ -1.39
ZNF28-201ENST00000339844 PTPN2P17706 415 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 PEX2P28328 305 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 PMLP29590 882 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 SLC7A1P30825 629 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 ADRA1BP35368 520 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 SLC26A3P40879 764 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 GRIA1P42261 906 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 MAGEA11P43364 429 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 ALDH3B2P48448 385 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 TUFMP49411 452 aaKnown RBP6.35□□□□□ -1.39
ZNF28-201ENST00000339844 RGS7P49802 495 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 EPHA5P54756 1037 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 NRLP54845 237 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 NUP107P57740 925 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 RHDQ02161 417 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 SPEM2Q0P670 501 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 CDH17Q12864 832 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 DLG1Q12959 904 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 ZBTB17Q13105 803 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 PLD1Q13393 1074 aa6.35□□□□□ -1.39
ZNF28-201ENST00000339844 APOFQ13790 326 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms