RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 TAF1BQ53T94 588 aaPredicted RBP17.65■□□□□ 0.42
CMTM1-204ENST00000336328 CCDC70Q6NSX1 233 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 DOK6Q6PKX4 331 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 SLC30A9Q6PML9 568 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 CCDC81Q6ZN84 652 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 ZNF438Q7Z4V0 828 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 GALNT13Q8IUC8 556 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 LPCAT1Q8NF37 534 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 SCAMP4Q969E2 229 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 OR2M4Q96R27 311 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 SRPK1Q96SB4 655 aaKnown RBP17.65■□□□□ 0.42
CMTM1-204ENST00000336328 RIOK2Q9BVS4 552 aaKnown RBP17.65■□□□□ 0.42
CMTM1-204ENST00000336328 FAM83DQ9H4H8 585 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 RMI1Q9H9A7 625 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 RAD18Q9NS91 495 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 SEPT10Q9P0V9 454 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 ACSL6Q9UKU0 697 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 ATXN7L1Q9ULK2 861 aaPredicted RBP17.65■□□□□ 0.42
CMTM1-204ENST00000336328 LOXL2Q9Y4K0 774 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 HEY1Q9Y5J3 304 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 BPTFQ12830 3046 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 AHCTF1Q8WYP5 2266 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 C1orf232A0A0U1RR37 186 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 APOL1O14791 398 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 B4GAT1O43505 415 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 AK4P27144 223 aaPredicted RBP17.64■□□□□ 0.41
CMTM1-204ENST00000336328 ACTR1BP42025 376 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 POLD2P49005 469 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 ACTR1AP61163 376 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 AP1B1Q10567 949 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 NR1D2Q14995 579 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 PTPRRQ15256 657 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 MAP9Q49MG5 647 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 PYCR3Q53H96 274 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 PHF19Q5T6S3 580 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 SLC9A4Q6AI14 798 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 NT5DC3Q86UY8 548 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 RHOT1Q8IXI2 618 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 CCNL2Q96S94 520 aaPredicted RBP17.64■□□□□ 0.41
CMTM1-204ENST00000336328 CHP1Q99653 195 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 CPNE5Q9HCH3 593 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 VPS18Q9P253 973 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 PISDQ9UG56 409 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 ZNHIT2Q9UHR6 403 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 TMEM98Q9Y2Y6 226 aa17.64■□□□□ 0.41
CMTM1-204ENST00000336328 KCNK1O00180 336 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 CASC3O15234 703 aaKnown RBP17.63■□□□□ 0.41
CMTM1-204ENST00000336328 MFAP3LO75121 409 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 CD82P27701 267 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 CD86P42081 329 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 SPINT3P49223 89 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 MAZP56270 477 aaKnown RBP17.63■□□□□ 0.41
CMTM1-204ENST00000336328 OR1D5P58170 312 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 SQSTM1Q13501 440 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 TRA2AQ13595 282 aaKnown RBP eCLIP17.63■□□□□ 0.41
CMTM1-204ENST00000336328 TCEAL1Q15170 157 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 QPCTQ16769 361 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 AMZ1Q400G9 498 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 CPNE8Q86YQ8 564 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 NAGSQ8N159 534 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 PLD5Q8N7P1 536 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 COX14Q96I36 57 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 PCDHB11Q9Y5F2 797 aa17.63■□□□□ 0.41
CMTM1-204ENST00000336328 AKR1B15C9JRZ8 316 aaPredicted RBP17.62■□□□□ 0.41
CMTM1-204ENST00000336328 K7ENP7 123 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 HGSO14964 777 aaPredicted RBP17.62■□□□□ 0.41
CMTM1-204ENST00000336328 SOD1P00441 154 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 SLC2A4P14672 509 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 NR2C2P49116 596 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 CLN3Q13286 438 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 TFDP2Q14188 446 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 IHHQ14623 411 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 SLC14A2Q15849 920 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 INO80CQ6PI98 192 aaPredicted RBP17.62■□□□□ 0.41
CMTM1-204ENST00000336328 RFLNAQ6ZTI6 216 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 USP53Q70EK8 1073 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 RFX6Q8HWS3 928 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 SLITRK4Q8IW52 837 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 SH3KBP1Q96B97 665 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 SLC25A51Q9H1U9 297 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 STN1Q9H668 368 aaKnown RBP17.62■□□□□ 0.41
CMTM1-204ENST00000336328 ZFYVE1Q9HBF4 777 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 MAGEE1Q9HCI5 957 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 SPTLC3Q9NUV7 552 aa17.62■□□□□ 0.41
CMTM1-204ENST00000336328 A0A0U1RQS6 177 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 INPP4BO15327 924 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 KRT1P04264 644 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 GPLD1P80108 840 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 MARK2Q7KZI7 788 aaKnown RBP17.61■□□□□ 0.41
CMTM1-204ENST00000336328 SFTPA2Q8IWL1 248 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 CNTD1Q8N815 330 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 AVL9Q8NBF6 648 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 CCDC112Q8NEF3 446 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 IMP4Q96G21 291 aaKnown RBP17.61■□□□□ 0.41
CMTM1-204ENST00000336328 SMIM14Q96QK8 99 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 AGAP2Q99490 1192 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 LUC7LQ9NQ29 371 aaKnown RBP17.61■□□□□ 0.41
CMTM1-204ENST00000336328 WDR70Q9NW82 654 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 KCNK4Q9NYG8 393 aa17.61■□□□□ 0.41
CMTM1-204ENST00000336328 PMS2P1A4D2B8 440 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms