RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SULT1A3P0DMM9 295 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SULT1A4P0DMN0 295 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 BRAFP15056 766 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 PGAM1P18669 254 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 IL6STP40189 918 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 DLGAP5Q15398 846 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 CREB3L3Q68CJ9 461 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 CEP68Q76N32 757 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 GTF3C2Q8WUA4 911 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 INTS6Q9UL03 887 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZHX2Q9Y6X8 837 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 V9GYS6 101 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 NPC1L1Q9UHC9 1359 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 UNCXA6NJT0 531 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF233A6NK53 670 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 AVILO75366 819 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 FGBP02675 491 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 CEBPBP17676 345 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 EIF2AK2P19525 551 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 RPL35P42766 123 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 C2orf80Q0P641 193 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 DARS2Q6PI48 645 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ELOA2Q8IYF1 753 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SNAPC3Q92966 411 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 TSPAN17Q96FV3 270 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 BIRC8Q96P09 236 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 TLR8Q9NR97 1041 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ETNK2Q9NVF9 386 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 EXTL2Q9UBQ6 330 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 DOCK11Q5JSL3 2073 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 UGT2B11O75310 529 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ENDOD1O94919 500 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADH6P28332 368 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 RGS4P49798 205 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 CARD18P57730 90 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 PPP1R3AQ16821 1122 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 PHF19Q5T6S3 580 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADAT2Q7Z6V5 191 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 DSELQ8IZU8 1212 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 AP2M1Q96CW1 435 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 WDR11Q9BZH6 1224 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 CDHR5Q9HBB8 845 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 HAO1Q9UJM8 370 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SAMHD1Q9Y3Z3 626 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 UGT2A1Q9Y4X1 527 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 FRMPD4Q14CM0 1322 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ARHGEF40Q8TER5 1519 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 A0A1B0GVI7 797 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SHOX2O60902 331 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 CD1BP29016 333 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 AIF1P55008 147 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 MTMR2Q13614 643 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 UBE2UQ5VVX9 321 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 PTCHD4Q6ZW05 846 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ABI3BPQ7Z7G0 1075 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 LGI2Q8N0V4 545 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 FUKQ8N0W3 1084 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC43A2Q8N370 569 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 GLYATL2Q8WU03 294 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC38A4Q969I6 547 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ARL11Q969Q4 196 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 LRRC46Q96FV0 321 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 MYNNQ9NPC7 610 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 TAS2R7Q9NYW3 318 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF639Q9UID6 485 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 HCN2Q9UL51 889 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SYNMO15061 1565 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 MEIS3P2A8K0S8 358 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 E7ESA3 106 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 CLIC1O00299 241 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 DDX3XO00571 662 aaKnown RBP eCLIP6.05□□□□□ -1.445e-6■■□□□ 14.2
CDC42BPA-201ENST00000334218 LDLRP01130 860 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 PSKH1P11801 424 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 GRIA2P42262 883 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 PCP4P48539 62 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 LSM3P62310 102 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 EXOC3L2Q2M3D2 409 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 MEI1Q5TIA1 1274 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ISLR2Q6UXK2 745 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 NFATC2IPQ8NCF5 419 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 KIAA0895Q8NCT3 520 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 RNF170Q96K19 258 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.05□□□□□ -1.442e-10■■□□□ 11.6
CDC42BPA-201ENST00000334218 TBC1D22BQ9NU19 505 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 DDX43Q9NXZ2 648 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 TRHDEQ9UKU6 1024 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ERGIC3Q9Y282 383 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF175Q9Y473 711 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 PFASO15067 1338 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 MYPNQ86TC9 1320 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 LNP1A1A4G5 178 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 TSPAN8P19075 237 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 CYP7A1P22680 504 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 AXLP30530 894 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 PDE4BQ07343 736 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 DSC3Q14574 896 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 STEAP3Q658P3 488 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 METTL2BQ6P1Q9 378 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF613Q6PF04 617 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 DHRSXQ8N5I4 330 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms