RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 OR10G6Q8NH81 332 aa11.19□□□□□ -0.62
POLR1B-202ENST00000333990 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
POLR1B-202ENST00000333990 ABHD8Q96I13 439 aa11.19□□□□□ -0.62
POLR1B-202ENST00000333990 TMEM109Q9BVC6 243 aa11.19□□□□□ -0.62
POLR1B-202ENST00000333990 PRRG3Q9BZD7 231 aa11.19□□□□□ -0.62
POLR1B-202ENST00000333990 CACNA2D2Q9NY47 1150 aa11.19□□□□□ -0.62
POLR1B-202ENST00000333990 CCDC167Q9P0B6 97 aa11.19□□□□□ -0.62
POLR1B-202ENST00000333990 TNRC6CQ9HCJ0 1690 aaKnown RBP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 ZNF840PA6NDX5 716 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 SNTNA6NMZ2 147 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 RASGRP1O95267 797 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 GOT2P00505 430 aaKnown RBP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 EEF1DP29692 281 aaKnown RBP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 CRHR1P34998 444 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 TIE1P35590 1138 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 DSG1Q02413 1049 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 CPSF6Q16630 551 aaKnown RBP eCLIP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 TRMT5Q32P41 509 aaKnown RBP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 SAMD4BQ5PRF9 694 aaKnown RBP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 CAMK1DQ8IU85 385 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 SLC39A11Q8N1S5 342 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 TRIT1Q9H3H1 467 aaKnown RBP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 NSUN3Q9H649 340 aaKnown RBP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 ZDHHC7Q9NXF8 308 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 NUDT4Q9NZJ9 180 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 FETUBQ9UGM5 382 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 TMEM59LQ9UK28 342 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 EPN2O95208 641 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 HLA-DQB2P05538 268 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 ATP6V1C1P21283 382 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 GJA8P48165 433 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 ERFP50548 548 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 PNLIPRP1P54315 467 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 PRKG2Q13237 762 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 ZNHIT3Q15649 155 aaPredicted RBP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 KRT73Q86Y46 540 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 EFCAB3Q8N7B9 438 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 ZNF513Q8N8E2 541 aaPredicted RBP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 SMARCD2Q92925 531 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 USP7Q93009 1102 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 TOP1MTQ969P6 601 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 KCTD14Q9BQ13 255 aaPredicted RBP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 TPST1O60507 370 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 FKBP6O75344 327 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 EPOP01588 193 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 SERPINB3P29508 390 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 CCNHP51946 323 aaPredicted RBP11.18□□□□□ -0.62
POLR1B-202ENST00000333990 OGDHQ02218 1023 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 PLEKHG6Q3KR16 790 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 CLLU1OSQ5K130 101 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 ANKRD22Q5VYY1 191 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 C22orf39Q6P5X5 142 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 ADGRD1Q6QNK2 874 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 ZNF621Q6ZSS3 439 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 AVL9Q8NBF6 648 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 ACTRT2Q8TDY3 377 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 LRIG1Q96JA1 1093 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 TMEM209Q96SK2 561 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 CYP2S1Q96SQ9 504 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 ZIC5Q96T25 663 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 PAAF1Q9BRP4 392 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 IMPAD1Q9NX62 359 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 HEBP2Q9Y5Z4 205 aa11.18□□□□□ -0.62
POLR1B-202ENST00000333990 C8GP07360 202 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 ABCB1P08183 1280 aaPredicted RBP11.17□□□□□ -0.62
POLR1B-202ENST00000333990 HGFP14210 728 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 HOXB2P14652 356 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 MYLK3Q32MK0 819 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 CFAP206Q8IYR0 622 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 CDK20Q8IZL9 346 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 DEFB107AQ8IZN7 70 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 C10orf53Q8N6V4 93 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 CEP19Q96LK0 163 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 CCT7Q99832 543 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 ZSCAN5AQ9BUG6 496 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 SPHK2Q9NRA0 654 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 SCN3BQ9NY72 215 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 RABGEF1Q9UJ41 708 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 V9GYQ6 96 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 MYH9P35579 1960 aaKnown RBP11.17□□□□□ -0.62
POLR1B-202ENST00000333990 MEIS3P2A8K0S8 358 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 SNAP91O60641 907 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 PRAMEF11O60813 436 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 UBOX5O94941 541 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 METTL18O95568 372 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 ZNF682O95780 498 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 CA3P07451 260 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 RPIAP49247 311 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 TBL3Q12788 808 aaKnown RBP11.17□□□□□ -0.62
POLR1B-202ENST00000333990 SF1Q15637 639 aaKnown RBP11.17□□□□□ -0.62
POLR1B-202ENST00000333990 FAM98BQ52LJ0 330 aaKnown RBP11.17□□□□□ -0.62
POLR1B-202ENST00000333990 ARSIQ5FYB1 569 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 TDRPQ86YL5 185 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 MMAAQ8IVH4 418 aaKnown RBP11.17□□□□□ -0.62
POLR1B-202ENST00000333990 RAB11FIP5Q9BXF6 653 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 BTBD1Q9H0C5 482 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 PCBD2Q9H0N5 130 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 MMADHCQ9H3L0 296 aaPredicted RBP11.17□□□□□ -0.62
POLR1B-202ENST00000333990 OR2AG2A6NM03 316 aa11.17□□□□□ -0.62
POLR1B-202ENST00000333990 FFAR3O14843 346 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms