RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 MTSS1O43312 755 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 RNASEH1O60930 286 aaKnown RBP11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 SNNO75324 88 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 CLDN11O75508 207 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 CNTN5O94779 1100 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 CBX6O95503 412 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 F9P00740 461 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 BPGMP07738 259 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 MYL2P10916 166 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 VAV1P15498 845 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 ACADSP16219 412 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 PGAM1P18669 254 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 GRK2P25098 689 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 EPHB2P29323 1055 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 GARSP41250 739 aaKnown RBP11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 RAP1GDS1P52306 607 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 PLK1P53350 603 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 CDH4P55283 916 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 OXCT1P55809 520 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 TMPRSS15P98073 1019 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 SULT2A1Q06520 285 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 ZNF177Q13360 481 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 PDK1Q15118 436 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 C5orf22Q49AR2 442 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 N4BP2L1Q5TBK1 243 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 TFAP2DQ7Z6R9 452 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 MMAAQ8IVH4 418 aaKnown RBP11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 WDR75Q8IWA0 830 aaKnown RBP11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 GPATCH11Q8N954 259 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 CCDC110Q8TBZ0 833 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 PTPRN2Q92932 1015 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 ALG14Q96F25 216 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 NAF1Q96HR8 494 aaKnown RBP11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 CSPG4P5Q96PW8 444 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 MUC3BQ9H195 1237 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 PCED1AQ9H1Q7 454 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 DHX35Q9H5Z1 703 aaKnown RBP11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 SLC25A13Q9UJS0 675 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 SCML1Q9UN30 329 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 SLCO1B1Q9Y6L6 691 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 ANKRD36A6QL64 1941 aa11.11□□□□□ -0.63
APOBEC3B-201ENST00000333467 A0A1W2PP55 124 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 A8MUI8 341 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 E9PAM4 449 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 RHOCP08134 193 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 SERPINA6P08185 405 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 SYPP08247 313 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 ATP6V1C1P21283 382 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 SERPINB3P29508 390 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 NNMTP40261 264 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 VHLP40337 213 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 MRPS35P82673 323 aaKnown RBP11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 ELAVL3Q14576 367 aaKnown RBP11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 TAF11Q15544 211 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 TEX44Q53QW1 395 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 RAB6CQ53S08 254 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 PPP6R3Q5H9R7 873 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 USP30Q70CQ3 517 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 ZNF534Q76KX8 674 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 PRPF39Q86UA1 669 aaKnown RBP11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 STK40Q8N2I9 435 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 HDDC3Q8N4P3 179 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 DEFB124Q8NES8 71 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 GANCQ8TET4 914 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 SREK1Q8WXA9 508 aaKnown RBP11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 MIEF2Q96C03 454 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 BIRC7Q96CA5 298 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 THOC1Q96FV9 657 aaKnown RBP11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 KLF6Q99612 283 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 FEM1AQ9BSK4 669 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 CADM1Q9BY67 442 aaKnown RBP11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 RAB6CQ9H0N0 254 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 DENND2DQ9H6A0 471 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 SGK2Q9HBY8 427 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 FBXL12Q9NXK8 326 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 MPP6Q9NZW5 540 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 MID2Q9UJV3 735 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 TBC1D30Q9Y2I9 924 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 OR51B4Q9Y5P0 310 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 MAD1L1Q9Y6D9 718 aa11.1□□□□□ -0.63
APOBEC3B-201ENST00000333467 IGLV3-10A0A075B6K4 115 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 FCHO1O14526 889 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 HGSO14964 777 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 BCAT2O15382 392 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 H2AFYO75367 372 aaKnown RBP11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 RNASEH2AO75792 299 aaKnown RBP11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 KLHL2O95198 593 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 ADH1BP00325 375 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 CSRP1P21291 193 aaKnown RBP11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 PMLP29590 882 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 HCAR3P49019 387 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 NIPAL4Q0D2K0 466 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 BST1Q10588 318 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 OVGP1Q12889 678 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 STX3Q13277 289 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 NAA25Q14CX7 972 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 PAFAH1B3Q15102 231 aaKnown RBP11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 CA9Q16790 459 aa11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 TRMT5Q32P41 509 aaKnown RBP11.09□□□□□ -0.63
APOBEC3B-201ENST00000333467 SPANXN3Q5MJ09 141 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms