RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PAK4O96013 591 aaPredicted RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 C1QTNF9P0C862 333 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 GIMD1P0DJR0 217 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 KRT10P13645 584 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 ZNF30P17039 623 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 CA4P22748 312 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 IL4RP24394 825 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 CALRP27797 417 aaKnown RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 IGFALSP35858 605 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 TRIM23P36406 574 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 GARSP41250 739 aaKnown RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 SLC1A1P43005 524 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 NUMBP49757 651 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 KIAA1024LP59773 190 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 RPL26P61254 145 aaKnown RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 GSTM4Q03013 218 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 BNIP3Q12983 259 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 TBX2Q13207 712 aaPredicted RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 DPYSL3Q14195 570 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 ZNF235Q14590 738 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 LRRC14Q15048 493 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 IFI16Q16666 785 aaKnown RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 CFAP58Q5T655 872 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 LIPIQ6XZB0 460 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 GATAD2AQ86YP4 633 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 CBARPQ8N350 705 aaPredicted RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 SLC25A45Q8N413 288 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 EID2Q8N6I1 236 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 ZNF548Q8NEK5 533 aaPredicted RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 OR6K2Q8NGY2 324 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 STK35Q8TDR2 534 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 CPLX3Q8WVH0 158 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 ZCCHC14Q8WYQ9 949 aaKnown RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 MAML1Q92585 1016 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 HSPH1Q92598 858 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 HDAC11Q96DB2 347 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 CELF6Q96J87 481 aaKnown RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 MCCC1Q96RQ3 725 aaPredicted RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 CALN1Q9BXU9 219 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 BRD8Q9H0E9 1235 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 DEF6Q9H4E7 631 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 PCDH12Q9NPG4 1184 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 CTTNBP2NLQ9P2B4 639 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 PHTF1Q9UMS5 762 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 RPL26L1Q9UNX3 145 aaKnown RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 DGKBQ9Y6T7 804 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 LRP4O75096 1905 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 PLXNB3Q9ULL4 1909 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 A0A0A6YYK5 440 aaPredicted RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 LMO7DNF2Z398 122 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 DFFAO00273 331 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 KCNK3O14649 394 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 MATN3O15232 486 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 INSIG1O15503 277 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 AQP9O43315 295 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 AKR1B10O60218 316 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 PIGNO95427 931 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 LCA5LO95447 670 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 PYGLP06737 847 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 ALPIP09923 528 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 CYP2A6P11509 494 aaPredicted RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 C6P13671 934 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 TCF4P15884 667 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 ZFXP17010 805 aaPredicted RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 KELP23276 732 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 HTR1BP28222 390 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 GKP32189 559 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 MMP13P45452 471 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 RGRP47804 291 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 THOP1P52888 689 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 IL9RQ01113 521 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 SLC10A7Q0GE19 358 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 RALGDSQ12967 914 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 EIF2B5Q13144 721 aaKnown RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 KRT81Q14533 505 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 NFATC4Q14934 902 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 RTP5Q14D33 572 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 SMTNL2Q2TAL5 461 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 ANKRD20A8PQ5CZ79 823 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 MARC1Q5VT66 337 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 NCBP2-AS2Q69YL0 99 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 ESRP1Q6NXG1 681 aaKnown RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 ZNF765Q7L2R6 523 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 PROSER1Q86XN7 944 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 CCDC170Q8IYT3 715 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 NDUFAF2Q8N183 169 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 DCBLD1Q8N8Z6 715 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 OR6C4Q8NGE1 309 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 NAT6Q93015 286 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 NXPE2Q96DL1 559 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 CCDC42Q96M95 316 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 COQ10AQ96MF6 247 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 BOCQ9BWV1 1114 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 POLR1EQ9GZS1 481 aaKnown RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 GSX1Q9H4S2 264 aaPredicted RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 NHEJ1Q9H9Q4 299 aaPredicted RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 ZFYVE1Q9HBF4 777 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 FZD3Q9NPG1 666 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 DDX56Q9NY93 547 aaKnown RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 GGT7Q9UJ14 662 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms