RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ERAP1Q9NZ08 941 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 RCOR3Q9P2K3 495 aaPredicted RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 ANAPC2Q9UJX6 822 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 CDH7Q9ULB5 785 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 ERGIC3Q9Y282 383 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 FNDC3AQ9Y2H6 1198 aaKnown RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 RAD54BQ9Y620 910 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 DAB1O75553 588 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 CLPXO76031 633 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 RASAL1O95294 804 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 ESRRBO95718 433 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 OXSR1O95747 527 aaPredicted RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 GPX3P22352 226 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 GMPSP49915 693 aaPredicted RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 KPNA2P52292 529 aaKnown RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 SH3BP2P78314 561 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 LAPTM5Q13571 262 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 ZNF362Q5T0B9 420 aaPredicted RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 INTS11Q5TA45 600 aaKnown RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 NIPAL1Q6NVV3 410 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 FAM117BQ6P1L5 589 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 GPRIN1Q7Z2K8 1008 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 PTGR2Q8N8N7 351 aaPredicted RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 B3GALNT2Q8NCR0 500 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 CHPT1Q8WUD6 406 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 ESAMQ96AP7 390 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 SDCCAG3Q96C92 435 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 PABPC5Q96DU9 382 aaKnown RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 SPATC1LQ9H0A9 340 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 PTBP2Q9UKA9 531 aaKnown RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 ERI2A8K979 691 aaKnown RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 UBXN8O00124 270 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 SNAP91O60641 907 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 TGFB3P10600 412 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 OCA2Q04671 838 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 PTPRCAPQ14761 206 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 MEP1AQ16819 746 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 CRTC3Q6UUV7 619 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 LARP4Q71RC2 724 aaKnown RBP eCLIP7.86□□□□□ -1.15
VMA21-201ENST00000330374 PLPPR4Q7Z2D5 763 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 R3HCC1LQ7Z5L2 792 aaKnown RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 SAPCD2Q86UD0 394 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 OSTM1Q86WC4 334 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 ZNF419Q96HQ0 510 aaPredicted RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 FAR2Q96K12 515 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 OSMRQ99650 979 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 CHID1Q9BWS9 393 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 GSTO2Q9H4Y5 243 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 NPDC1Q9NQX5 325 aaPredicted RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 AASSQ9UDR5 926 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 DNAJC15Q9Y5T4 150 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 SIP14410 1827 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 A0A1B0GTL3 188 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 C19orf81C9J6K1 198 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 INHBBP09529 407 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 MZF1P28698 734 aaPredicted RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 NKX2-5P52952 324 aaPredicted RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 UGT3A2Q3SY77 523 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 CCNYL2Q5T2Q4 361 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 DCLRE1AQ6PJP8 1040 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 DSG4Q86SJ6 1040 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 ATPAF2Q8N5M1 289 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 ZNF420Q8TAQ5 688 aaPredicted RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 TWIST2Q8WVJ9 160 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 NRBF2Q96F24 287 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 ZBED3Q96IU2 234 aaPredicted RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 HSFY1Q96LI6 401 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 TEX37Q96LM6 180 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 MYRFLQ96LU7 910 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 HNRNPABQ99729 332 aaKnown RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 MCMBPQ9BTE3 642 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 NANOGQ9H9S0 305 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 SMURF2Q9HAU4 748 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 RBM22Q9NW64 420 aaKnown RBP eCLIP7.86□□□□□ -1.15
VMA21-201ENST00000330374 TRHDEQ9UKU6 1024 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 SULT1C4O75897 302 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 ATP6V0D1P61421 351 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 WSCD1Q658N2 575 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 SFRP1Q8N474 314 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 ABHD11Q8NFV4 315 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 SLC30A3Q99726 388 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 INTS7Q9NVH2 962 aaKnown RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 GNPTGQ9UJJ9 305 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 SARDHQ9UL12 918 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 A0A087X1B8 175 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 FXYD1O00168 92 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 CNOT3O75175 753 aaKnown RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 GMNNO75496 209 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 FYNP06241 537 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 PIRTP0C851 137 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 CYP2C9P11712 490 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 NPR3P17342 541 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 RFC2P35250 354 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 ARCN1P48444 511 aaKnown RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 PSMD8P48556 350 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 PLA2G16P53816 162 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 YWHAHQ04917 246 aaPredicted RBP7.86□□□□□ -1.15
VMA21-201ENST00000330374 DGCR6Q14129 220 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 ARL13BQ3SXY8 428 aa7.86□□□□□ -1.15
VMA21-201ENST00000330374 PAGE2BQ5JRK9 111 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms