RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 ZNF830Q96NB3 372 aaPredicted RBP23.19■■□□□ 1.3
TMEM54-201ENST00000329151 CLMPQ9H6B4 373 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 ZNHIT2Q9UHR6 403 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 TLN1Q9Y490 2541 aaKnown RBP23.19■■□□□ 1.3
TMEM54-201ENST00000329151 A0A1W2PQJ5 194 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 DUX1O43812 170 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 MFSD11O43934 449 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 FUCA1P04066 466 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 MMRN1Q13201 1228 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 PTPRRQ15256 657 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 TEX26Q8N6G2 289 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 CCHCR1Q8TD31 782 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 CPLX3Q8WVH0 158 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 ASPSCR1Q9BZE9 553 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 SLC39A1Q9NY26 324 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 AMACRQ9UHK6 382 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 CHKBQ9Y259 395 aa23.18■■□□□ 1.3
TMEM54-201ENST00000329151 TRBV23OR9-2A0A075B6M9 112 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 IGHV1OR21-1A0A087WYE8 117 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 MATN3O15232 486 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 PPM1DO15297 605 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 SLC2A4P14672 509 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 MX2P20592 715 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 MAN1A1P33908 653 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 DSC2Q02487 901 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 GALNT2Q10471 571 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 NLRP8Q86W28 1048 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 DTX1Q86Y01 620 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 EXD3Q8N9H8 876 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 CCNYQ8ND76 341 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 LPCAT1Q8NF37 534 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 ZNF564Q8TBZ8 553 aaPredicted RBP23.17■■□□□ 1.3
TMEM54-201ENST00000329151 PTCD2Q8WV60 388 aaKnown RBP23.17■■□□□ 1.3
TMEM54-201ENST00000329151 ART4Q93070 314 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 RIOK2Q9BVS4 552 aaKnown RBP23.17■■□□□ 1.3
TMEM54-201ENST00000329151 CTTNBP2NLQ9P2B4 639 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 PLEKHM1Q9Y4G2 1056 aa23.17■■□□□ 1.3
TMEM54-201ENST00000329151 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.16■■□□□ 1.3
TMEM54-201ENST00000329151 GOLGA6L19H0YKK7 550 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 CYP1A2P05177 515 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 FAM87AP0C7U9 286 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 CCNCP24863 283 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 MPSTP25325 297 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 STC1P52823 247 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 RAB15P59190 212 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 RPL26P61254 145 aaKnown RBP23.16■■□□□ 1.3
TMEM54-201ENST00000329151 ZBED6P86452 979 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 PTSQ03393 145 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 PDK2Q15119 407 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 PYCR3Q53H96 274 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 SNAP47Q5SQN1 464 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 DCAF12Q5T6F0 453 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 ALKBH5Q6P6C2 394 aaKnown RBP23.16■■□□□ 1.3
TMEM54-201ENST00000329151 ZNF574Q6ZN55 896 aaPredicted RBP23.16■■□□□ 1.3
TMEM54-201ENST00000329151 SCARF2Q96GP6 870 aaPredicted RBP23.16■■□□□ 1.3
TMEM54-201ENST00000329151 TDRD1Q9BXT4 1180 aaKnown RBP23.16■■□□□ 1.3
TMEM54-201ENST00000329151 PCDH9Q9HC56 1237 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 PKD2L2Q9NZM6 624 aa23.16■■□□□ 1.3
TMEM54-201ENST00000329151 RPL26L1Q9UNX3 145 aaKnown RBP23.16■■□□□ 1.3
TMEM54-201ENST00000329151 LUC7L2Q9Y383 392 aaKnown RBP23.16■■□□□ 1.3
TMEM54-201ENST00000329151 A0A0U1RQS6 177 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 C1orf232A0A0U1RR37 186 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 PYCARD-AS1I3L0S3 204 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 FZD6O60353 706 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 MAP3K6O95382 1288 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 KRT7P08729 469 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 CD48P09326 243 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 THRAP10827 490 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 FGF3P11487 239 aaPredicted RBP23.15■■□□□ 1.3
TMEM54-201ENST00000329151 UBASH3AP57075 661 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 FANCCQ00597 558 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 DPYSL3Q14195 570 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 PAFAH1B3Q15102 231 aaKnown RBP23.15■■□□□ 1.3
TMEM54-201ENST00000329151 LINC00303Q3SY05 128 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 ANKRD20A8PQ5CZ79 823 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 HGSNATQ68CP4 663 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 TMEM71Q6P5X7 295 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 RFLNAQ6ZTI6 216 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 CHST15Q7LFX5 561 aaPredicted RBP23.15■■□□□ 1.3
TMEM54-201ENST00000329151 SLC37A2Q8TED4 501 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 SH3KBP1Q96B97 665 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 ZNF670Q9BS34 389 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 DDA1Q9BW61 102 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 LCMT1Q9UIC8 334 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 PCDHGA3Q9Y5H0 932 aa23.15■■□□□ 1.3
TMEM54-201ENST00000329151 EFCAB7A8K855 629 aa23.14■■□□□ 1.29
TMEM54-201ENST00000329151 PPFIA2O75334 1257 aa23.14■■□□□ 1.29
TMEM54-201ENST00000329151 WISP1O95388 367 aa23.14■■□□□ 1.29
TMEM54-201ENST00000329151 CLDN7O95471 211 aa23.14■■□□□ 1.29
TMEM54-201ENST00000329151 SOD1P00441 154 aa23.14■■□□□ 1.29
TMEM54-201ENST00000329151 MAPK9P45984 424 aa23.14■■□□□ 1.29
TMEM54-201ENST00000329151 FASLGP48023 281 aa23.14■■□□□ 1.29
TMEM54-201ENST00000329151 HHEXQ03014 270 aa23.14■■□□□ 1.29
TMEM54-201ENST00000329151 TBR1Q16650 682 aa23.14■■□□□ 1.29
TMEM54-201ENST00000329151 NCBP2-AS2Q69YL0 99 aa23.14■■□□□ 1.29
TMEM54-201ENST00000329151 ZNF761Q86XN6 746 aaPredicted RBP23.14■■□□□ 1.29
TMEM54-201ENST00000329151 RAVER1Q8IY67 606 aaKnown RBP23.14■■□□□ 1.29
TMEM54-201ENST00000329151 CACNA2D3Q8IZS8 1091 aa23.14■■□□□ 1.29
TMEM54-201ENST00000329151 CTNNBL1Q8WYA6 563 aaPredicted RBP23.14■■□□□ 1.29
TMEM54-201ENST00000329151 MAML1Q92585 1016 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms