RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ZBED2Q9BTP6 218 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 COMMD3-BMI1R4GMX3 469 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 FNDC1Q4ZHG4 1894 aaPredicted RBP17.35■□□□□ 0.37
COL9A1-201ENST00000320755 LAMA2P24043 3122 aaKnown RBP17.35■□□□□ 0.37
COL9A1-201ENST00000320755 SMIM31A0A1B0GVY4 71 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 AP1G1O43747 822 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 OR1I1O60431 355 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 BAIAP3O94812 1187 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 ARMC3Q5W041 872 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 KRT80Q6KB66 452 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 HMBOX1Q6NT76 420 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 GLT6D1Q7Z4J2 308 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 TMEM126BQ8IUX1 230 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 FEM1CQ96JP0 617 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 ACOX2Q99424 681 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 EFHD1Q9BUP0 239 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 ZFP37Q9Y6Q3 630 aaPredicted RBP17.35■□□□□ 0.37
COL9A1-201ENST00000320755 NPEPPSL1A6NEC2 478 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 DRGXA6NNA5 263 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 PDLIM1O00151 329 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 CBX4O00257 560 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 BTN3A1O00481 513 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 SLC7A1P30825 629 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 SLC6A4P31645 630 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 RGMBQ6NW40 437 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 LPCAT1Q8NF37 534 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 ZFP28Q8NHY6 868 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 ZNF512Q96ME7 567 aaPredicted RBP17.34■□□□□ 0.37
COL9A1-201ENST00000320755 ATOH8Q96SQ7 321 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 C1orf50Q9BV19 199 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 POLG2Q9UHN1 485 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 NDUFAF1Q9Y375 327 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 RNF11Q9Y3C5 154 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 V9GYQ6 96 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 VILLO15195 856 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 GPR39O43194 453 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 HSPA13P48723 471 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 FCGRTP55899 365 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 PLOD1Q02809 727 aaPredicted RBP17.34■□□□□ 0.37
COL9A1-201ENST00000320755 KLHDC10Q6PID8 442 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 DENND1CQ8IV53 801 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 AHI1Q8N157 1196 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 HBEGFQ99075 208 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 SLC30A3Q99726 388 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 CINPQ9BW66 212 aaPredicted RBP17.34■□□□□ 0.37
COL9A1-201ENST00000320755 TAS2R13Q9NYV9 303 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 PLOD2O00469 737 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 ECI2O75521 394 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 NDST3O95803 873 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 SLC26A3P40879 764 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 TRIM71Q2Q1W2 868 aaKnown RBP17.34■□□□□ 0.37
COL9A1-201ENST00000320755 TBCELQ5QJ74 424 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 C16orf59Q7L2K0 433 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 NMRK2Q9NPI5 230 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 SARDHQ9UL12 918 aa17.34■□□□□ 0.37
COL9A1-201ENST00000320755 TCRBV3S1A0A5B6 114 aa17.33■□□□□ 0.37
COL9A1-201ENST00000320755 LBPP18428 481 aa17.33■□□□□ 0.37
COL9A1-201ENST00000320755 YBEYP58557 167 aaPredicted RBP17.33■□□□□ 0.37
COL9A1-201ENST00000320755 GNA12Q03113 381 aa17.33■□□□□ 0.37
COL9A1-201ENST00000320755 SLC15A3Q8IY34 581 aa17.33■□□□□ 0.37
COL9A1-201ENST00000320755 TRIML2Q8N7C3 387 aa17.33■□□□□ 0.37
COL9A1-201ENST00000320755 OR2T34Q8NGX1 318 aa17.33■□□□□ 0.37
COL9A1-201ENST00000320755 OR2T3Q8NH03 318 aa17.33■□□□□ 0.37
COL9A1-201ENST00000320755 STAG3L4Q8TBR4 150 aa17.33■□□□□ 0.37
COL9A1-201ENST00000320755 TADA1Q96BN2 335 aa17.33■□□□□ 0.37
COL9A1-201ENST00000320755 MTMR11A4FU01 709 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 SOCS2O14508 198 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 NIPSNAP2O75323 286 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 SEC24DO94855 1032 aaPredicted RBP17.33■□□□□ 0.36
COL9A1-201ENST00000320755 MT-ND1P03886 318 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 MTHFD1P11586 935 aaKnown RBP17.33■□□□□ 0.36
COL9A1-201ENST00000320755 TRAP1Q12931 704 aaKnown RBP17.33■□□□□ 0.36
COL9A1-201ENST00000320755 LSAMPQ13449 338 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 RBBP7Q16576 425 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 UGT3A1Q6NUS8 523 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 PRSS55Q6UWB4 352 aaPredicted RBP17.33■□□□□ 0.36
COL9A1-201ENST00000320755 LINGO4Q6UY18 593 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 PIANPQ8IYJ0 282 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 SIDT2Q8NBJ9 832 aaKnown RBP17.33■□□□□ 0.36
COL9A1-201ENST00000320755 MDGA1Q8NFP4 955 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 TEX37Q96LM6 180 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 CCT7Q99832 543 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 MRPS26Q9BYN8 205 aaKnown RBP17.33■□□□□ 0.36
COL9A1-201ENST00000320755 GKN1Q9NS71 199 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 MRGBPQ9NV56 204 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 CROCCQ5TZA2 2017 aa17.33■□□□□ 0.36
COL9A1-201ENST00000320755 H3BSA7 217 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 EOMESO95936 686 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 IRF1P10914 325 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 RPL17P18621 184 aaKnown RBP17.32■□□□□ 0.36
COL9A1-201ENST00000320755 PSMD8P48556 350 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 ACADVLP49748 655 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 CAP1Q01518 475 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 RAD51Q06609 339 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 RABL3Q5HYI8 236 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 ANKS6Q68DC2 871 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 GALNT7Q86SF2 657 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 NCSTNQ92542 709 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 CDK15Q96Q40 435 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 OLA1Q9NTK5 396 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms