RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PRO3102Q9H379 93 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 STOML1Q9UBI4 398 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 EVLQ9UI08 416 aaPredicted RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 PKP3Q9Y446 797 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 TRAF6Q9Y4K3 522 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 ASB3Q9Y575 518 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 ATP6AP2A0A1C7CYW4 349 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 LRRC14BA6NHZ5 514 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 SDHDO14521 159 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 NIPSNAP2O75323 286 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 ATP6AP2O75787 350 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 MTHFD2P13995 350 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 CHRM3P20309 590 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 PRDX6P30041 224 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 TTPAP49638 278 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 TBL3Q12788 808 aaKnown RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 ILF2Q12905 390 aaKnown RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 CYLC2Q14093 348 aaPredicted RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 PPP1R3AQ16821 1122 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 GEN1Q17RS7 908 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 UNC50Q53HI1 259 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 HTR3DQ70Z44 454 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 LYSMD3Q7Z3D4 306 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 HPS6Q86YV9 775 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 TMC8Q8IU68 726 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.54□□□□□ -1.2
IFT88-201ENST00000319980 AFAP1L2Q8N4X5 818 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 FIBCD1Q8N539 461 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 KREMEN2Q8NCW0 462 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 RP9Q8TA86 221 aaKnown RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 ACTRT2Q8TDY3 377 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 SLC22A17Q8WUG5 538 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 MAELQ96JY0 434 aaKnown RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 SLC30A3Q99726 388 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 RTKNQ9BST9 563 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 SLC46A2Q9BY10 475 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 TNKS2Q9H2K2 1166 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 POPDC3Q9HBV1 291 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 SARS2Q9NP81 518 aaKnown RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 CDH22Q9UJ99 828 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 COPG1Q9Y678 874 aaKnown RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 A0A1W2PPC1 479 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 CCDC189A1A4V9 331 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 NCF1BA6NI72 391 aaPredicted RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 NCF1CA8MVU1 366 aaPredicted RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 A8MX80 341 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 PFDN6O15212 129 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 BNIP3LO60238 219 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 FZD6O60353 706 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 NCF1P14598 390 aaPredicted RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 PKMP14618 531 aaKnown RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 CD70P32970 193 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 HMGCLP35914 325 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 SH3BP2P78314 561 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 CREMQ03060 361 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 SLC34A1Q06495 639 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 RAD51Q06609 339 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 GALNT1Q10472 559 aaPredicted RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 LMAN2Q12907 356 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 TSNQ15631 228 aaKnown RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 ZRSR2Q15696 482 aaKnown RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 TCHHL1Q5QJ38 904 aaPredicted RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 LILRA6Q6PI73 481 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 CMTM8Q8IZV2 173 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 ELMOD1Q8N336 334 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 TTC30BQ8N4P2 665 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 CPSF7Q8N684 471 aaKnown RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 SIDT2Q8NBJ9 832 aaKnown RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 RHEBL1Q8TAI7 183 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 STAG3L4Q8TBR4 150 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 NAT14Q8WUY8 206 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 ACDQ96AP0 544 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 L3HYPDHQ96EM0 354 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 ATOH8Q96SQ7 321 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 TCF25Q9BQ70 676 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 TRMOQ9BU70 441 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 LRRC3Q9BY71 257 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 TFB2MQ9H5Q4 396 aaKnown RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 ZBTB26Q9HCK0 441 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 HACD3Q9P035 362 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 STX18Q9P2W9 335 aaKnown RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 DNMT3BQ9UBC3 853 aaKnown RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 PACSIN3Q9UKS6 424 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 RNF112Q9ULX5 631 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 MAFFQ9ULX9 164 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 WASF2Q9Y6W5 498 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 TRAV19A0A0A6YYK7 116 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 LCHNA4D1U4 455 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 IQCF5A8MTL0 148 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 E5RI56 91 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 CDC7O00311 574 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 CCL16O15467 120 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 PGLSO95336 258 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 PYGLP06737 847 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 ADH1AP07327 375 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 CCNG1P51959 295 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 AP1S1P61966 158 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 SLC7A9P82251 487 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 BCL2L1Q07817 233 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 MPPE1Q53F39 396 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms