RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 LRFN2Q9ULH4 789 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 HDAC3O15379 428 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 PSMD3O43242 534 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 PEX11BO96011 259 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 RPS24P62847 133 aaKnown RBP15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 ZNF235Q14590 738 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 GK5Q6ZS86 529 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 ANKRD60Q9BZ19 345 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 SLC25A51Q9H1U9 297 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 EFCAB1Q9HAE3 211 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 TNFRSF12AQ9NP84 129 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 BCAP29Q9UHQ4 241 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 CDH7Q9ULB5 785 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 PCDHB7Q9Y5E2 793 aa15.52■□□□□ 0.08
SHROOM1-201ENST00000319854 GOLGA8CPA6NN73 597 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 GIPC1O14908 333 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 TIPRLO75663 272 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 GJA8P48165 433 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 SLC11A1P49279 550 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 KPNA1P52294 538 aaPredicted RBP15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 CDH13P55290 713 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 CCL23P55773 120 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 CYP2A13Q16696 494 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 CCDC92Q53HC0 331 aaPredicted RBP15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 TSTD2Q5T7W7 516 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 CHSY3Q70JA7 882 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 SETD3Q86TU7 594 aaPredicted RBP15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 DDHD1Q8NEL9 900 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 HM13Q8TCT9 377 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 LPGAT1Q92604 370 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 ISL2Q96A47 359 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 NPLQ9BXD5 320 aaPredicted RBP15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 ZBTB26Q9HCK0 441 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 GKN1Q9NS71 199 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 PCDHGA7Q9Y5G6 932 aa15.52■□□□□ 0.07
SHROOM1-201ENST00000319854 A0A1W2PQ45 241 aaPredicted RBP15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 A0A1W2PQY0 241 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 SOBPA7XYQ1 873 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 DLGAP1O14490 977 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 NME5P56597 212 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 GEN1Q17RS7 908 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 C16orf87Q6PH81 154 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 KDELC1Q6UW63 502 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 ZBTB49Q6ZSB9 765 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 TMCO2Q7Z6W1 182 aaPredicted RBP15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 DEFB128Q7Z7B8 93 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 LSMEM2Q8N112 164 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 ATP6V0D2Q8N8Y2 350 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 OR13J1Q8NGT2 312 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 STYXQ8WUJ0 223 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 SLC39A13Q96H72 371 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 DRC3Q9H069 523 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 TREX1Q9NSU2 369 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 SMPD4Q9NXE4 827 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 RAP2CQ9Y3L5 183 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 COPG1Q9Y678 874 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 MYO7AQ13402 2215 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 NYNRINQ9P2P1 1898 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 UBA6A0AVT1 1052 aaPredicted RBP15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 TBKBP1A7MCY6 615 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 TRIM38O00635 465 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 CABYRO75952 493 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 TM4SF4P48230 202 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 ACADVLP49748 655 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 TRIM25Q14258 630 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 CLEC6AQ6EIG7 209 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 C16orf59Q7L2K0 433 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 CPSF7Q8N684 471 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 TFAP2CQ92754 450 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 IMP4Q96G21 291 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 MCMBPQ9BTE3 642 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 MUC3BQ9H195 1237 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 MRPL46Q9H2W6 279 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 SPATA7Q9P0W8 599 aa15.51■□□□□ 0.07
SHROOM1-201ENST00000319854 HEATR9A2RTY3 570 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 MTMR11A4FU01 709 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 H0YJX3 145 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 CACNG3O60359 315 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 PQBP1O60828 265 aaKnown RBP15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 RHOQP17081 205 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 HOXC13P31276 330 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 CDKN2DP55273 166 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 PRKCQQ04759 706 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 MFSD4BQ5TF39 518 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 CHST15Q7LFX5 561 aaPredicted RBP15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 DENND1CQ8IV53 801 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 ASB9Q96DX5 294 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 BTN2A3PQ96KV6 586 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 GPR78Q96P69 363 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 TLR8Q9NR97 1041 aaKnown RBP15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 SMOXQ9NWM0 555 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 FADS3Q9Y5Q0 445 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 PRORSD1PA6NEY8 169 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 NBNO60934 754 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 GJB5O95377 273 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 EOMESO95936 686 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 C8BP07358 591 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 MMP2P08253 660 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 PSME3P61289 254 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms