RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 VAPBO95292 243 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 MYL2P10916 166 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 MZF1P28698 734 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-201ENST00000317677 BMPR1AP36894 532 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 RXRGP48443 463 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 ZNF177Q13360 481 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-201ENST00000317677 CCNIQ14094 377 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 SEPT6Q14141 434 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 ZNF235Q14590 738 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 C16orf72Q14CZ0 275 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 DLG2Q15700 870 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 RNF219Q5W0B1 726 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-201ENST00000317677 PDPK2PQ6A1A2 396 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 DENND6AQ8IWF6 608 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 CNTN4Q8IWV2 1026 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 CATSPER1Q8NEC5 780 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 SPPL3Q8TCT6 385 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 CHPT1Q8WUD6 406 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 PTCD2Q8WV60 388 aaKnown RBP13.04□□□□□ -0.32
CPNE1-201ENST00000317677 EME1Q96AY2 570 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 CLPTM1LQ96KA5 538 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 TRIB3Q96RU7 358 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 GAS2L1Q99501 681 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-201ENST00000317677 C17orf80Q9BSJ5 609 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 CCDC106Q9BWC9 280 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 POLR1EQ9GZS1 481 aaKnown RBP13.04□□□□□ -0.32
CPNE1-201ENST00000317677 NKX2-4Q9H2Z4 354 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 TPK1Q9H3S4 243 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 SNX15Q9NRS6 342 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 ZNF358Q9NW07 568 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 IRAK3Q9Y616 596 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 A0A1W2PRU2 124 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 CCL16O15467 120 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 SNAP91O60641 907 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 TBL1XO60907 577 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 SIN3BO75182 1162 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 ZMPSTE24O75844 475 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 LATS1O95835 1130 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 LRG1P02750 347 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 ADH1AP07327 375 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 FAM58BPP0C7Q3 252 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 THRAP10827 490 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 CR2P20023 1033 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 PRDX6P30041 224 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 CTNNB1P35222 781 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 HSPA13P48723 471 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 ENTPD1P49961 510 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 SERPINH1P50454 418 aaKnown RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 CSE1LP55060 971 aaKnown RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 RPS3AP61247 264 aaKnown RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 MPP1Q00013 466 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 CAMK1Q14012 370 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 TRIP10Q15642 601 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 LRRC36Q1X8D7 754 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 SETD3Q86TU7 594 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 MFSD6LQ8IWD5 586 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 PLD6Q8N2A8 252 aaKnown RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 PNPLA1Q8N8W4 532 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 OR13J1Q8NGT2 312 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 ACMSDQ8TDX5 336 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 PYDC1Q8WXC3 89 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 ALG14Q96F25 216 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 VPS39Q96JC1 886 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 EXOC2Q96KP1 924 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 PSKH2Q96QS6 385 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 RANBP9Q96S59 729 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 UBA2Q9UBT2 640 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 CDH7Q9ULB5 785 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 KCTD3Q9Y597 815 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 OR51B4Q9Y5P0 310 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 ATG2AQ2TAZ0 1938 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 MYO7AQ13402 2215 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 EIF3FO00303 357 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 TLL1O43897 1013 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 AHSGP02765 367 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 CAPNS1P04632 268 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 ENO1P06733 434 aaKnown RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 OCM2P0CE71 109 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 OCMP0CE72 109 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 MYOGP15173 224 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 AOC1P19801 751 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 SPRP35270 261 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 IRS1P35568 1242 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 CLCN4P51793 760 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 SLC7A9P82251 487 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 CTBP1Q13363 440 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 GALNT3Q14435 633 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 GRM3Q14832 879 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 TSTD2Q5T7W7 516 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 PPP2R2DQ66LE6 453 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 KIAA0930Q6ICG6 404 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 KBTBD6Q86V97 674 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 ZC3HC1Q86WB0 502 aaKnown RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 RNF135Q8IUD6 432 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 MRPL43Q8N983 215 aaKnown RBP13.03□□□□□ -0.32
CPNE1-201ENST00000317677 POF1BQ8WVV4 589 aa13.03□□□□□ -0.32
CPNE1-201ENST00000317677 GPATCH1Q9BRR8 931 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms