RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 C6orf203Q9P0P8 240 aaPredicted RBP20.53■□□□□ 0.88
TTC39C-202ENST00000317571 TANC1Q9C0D5 1861 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 MICAL3Q7RTP6 2002 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 ANKRD12Q6UB98 2062 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.52■□□□□ 0.88
TTC39C-202ENST00000317571 A0A1B0GVM2 712 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 PITPNM1O00562 1244 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 TRIM38O00635 465 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 PEX1O43933 1283 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 PQBP1O60828 265 aaKnown RBP20.52■□□□□ 0.88
TTC39C-202ENST00000317571 KERAO60938 352 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 CLASP2O75122 1294 aaKnown RBP20.52■□□□□ 0.88
TTC39C-202ENST00000317571 GPC4O75487 556 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 ECI2O75521 394 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 PRAMEF12O95522 483 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 HOXB8P17481 243 aaPredicted RBP20.52■□□□□ 0.88
TTC39C-202ENST00000317571 GPX3P22352 226 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 TUFMP49411 452 aaKnown RBP20.52■□□□□ 0.88
TTC39C-202ENST00000317571 ZNF177Q13360 481 aaPredicted RBP20.52■□□□□ 0.88
TTC39C-202ENST00000317571 ADGRE1Q14246 886 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 USP41Q3LFD5 358 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 CTSL3PQ5NE16 218 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 KANK2Q63ZY3 851 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 C8orf82Q6P1X6 216 aaPredicted RBP20.52■□□□□ 0.88
TTC39C-202ENST00000317571 LAYNQ6UX15 382 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 PDZD8Q8NEN9 1154 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 TWIST2Q8WVJ9 160 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 TRAPPC9Q96Q05 1148 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 PKP2Q99959 881 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 KLF16Q9BXK1 252 aaPredicted RBP20.52■□□□□ 0.88
TTC39C-202ENST00000317571 DERL2Q9GZP9 239 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 SMPD4Q9NXE4 827 aa20.52■□□□□ 0.88
TTC39C-202ENST00000317571 FNDC3AQ9Y2H6 1198 aaKnown RBP20.52■□□□□ 0.88
TTC39C-202ENST00000317571 PRORSD1PA6NEY8 169 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 HOXA2O43364 376 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 NIPSNAP2O75323 286 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 SRP72O76094 671 aaKnown RBP20.52■□□□□ 0.87
TTC39C-202ENST00000317571 TSPAN12O95859 305 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 SNRPB2P08579 225 aaKnown RBP20.52■□□□□ 0.87
TTC39C-202ENST00000317571 FGF4P08620 206 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 VCLP18206 1134 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 MZF1P28698 734 aaPredicted RBP20.52■□□□□ 0.87
TTC39C-202ENST00000317571 NME5P56597 212 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 ECT2LQ008S8 904 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 ADGRF1Q5T601 910 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 CHST9Q7L1S5 443 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 TICAM1Q8IUC6 712 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 EFHBQ8N7U6 833 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 OVCA2Q8WZ82 227 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 LRCH3Q96II8 777 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 GCNAQ96QF7 691 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 SLC22A12Q96S37 553 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 UNC93B1Q9H1C4 597 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 BACE2Q9Y5Z0 518 aa20.52■□□□□ 0.87
TTC39C-202ENST00000317571 NPEPPSL1A6NEC2 478 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 C9JVG2 144 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 TMCC1O94876 653 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 MYCP01106 439 aaPredicted RBP20.51■□□□□ 0.87
TTC39C-202ENST00000317571 GFAPP14136 432 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 EEF1DP29692 281 aaKnown RBP20.51■□□□□ 0.87
TTC39C-202ENST00000317571 PRDX3P30048 256 aaKnown RBP20.51■□□□□ 0.87
TTC39C-202ENST00000317571 YBX1P67809 324 aaKnown RBP20.51■□□□□ 0.87
TTC39C-202ENST00000317571 XIAPP98170 497 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 STX5Q13190 355 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 PTPRNQ16849 979 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 CCDC97Q96F63 343 aaPredicted RBP20.51■□□□□ 0.87
TTC39C-202ENST00000317571 DCUN1D1Q96GG9 259 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 ZFRQ96KR1 1074 aaKnown RBP20.51■□□□□ 0.87
TTC39C-202ENST00000317571 BTRCQ9Y297 605 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 DTNAQ9Y4J8 743 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 OAS3Q9Y6K5 1087 aaKnown RBP20.51■□□□□ 0.87
TTC39C-202ENST00000317571 PLXNA4Q9HCM2 1894 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 LCHNA4D1U4 455 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 SUPT3HB4E1H0 165 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 MRASO14807 208 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 AZIN1O14977 448 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 SUPT3HO75486 399 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 AGTR2P50052 363 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 ZXDBP98169 803 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 MMEL1Q495T6 779 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 DEFB128Q7Z7B8 93 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 TMEM150AQ86TG1 271 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 TTC30BQ8N4P2 665 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 WFDC5Q8TCV5 224 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 FUBP1Q96AE4 644 aaKnown RBP20.51■□□□□ 0.87
TTC39C-202ENST00000317571 EID2BQ96D98 161 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 IGSF21Q96ID5 467 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 MUC3BQ9H195 1237 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 LHX3Q9UBR4 397 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 AFF4Q9UHB7 1163 aaKnown RBP20.51■□□□□ 0.87
TTC39C-202ENST00000317571 YIPF1Q9Y548 306 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 ASB1Q9Y576 335 aa20.51■□□□□ 0.87
TTC39C-202ENST00000317571 ANKRD66B4E2M5 251 aa20.5■□□□□ 0.87
TTC39C-202ENST00000317571 DNAJA2O60884 412 aa20.5■□□□□ 0.87
TTC39C-202ENST00000317571 RNASEH2AO75792 299 aaKnown RBP20.5■□□□□ 0.87
TTC39C-202ENST00000317571 ABLIM3O94929 683 aa20.5■□□□□ 0.87
TTC39C-202ENST00000317571 MC4RP32245 332 aa20.5■□□□□ 0.87
TTC39C-202ENST00000317571 ALDH7A1P49419 539 aaKnown RBP20.5■□□□□ 0.87
TTC39C-202ENST00000317571 SIDT2Q8NBJ9 832 aaKnown RBP20.5■□□□□ 0.87
TTC39C-202ENST00000317571 ASB9Q96DX5 294 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms