RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 DHCR24Q15392 516 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 CHRNA6Q15825 494 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 PFKFB4Q16877 469 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 LACTB2Q53H82 288 aaPredicted RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 PPP2R2DQ66LE6 453 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 TANGO2Q6ICL3 276 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 BEND7Q8N7W2 519 aaPredicted RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 OR2AP1Q8NGE2 309 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 CHFRQ96EP1 664 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 KIAA1522Q9P206 1035 aaPredicted RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 COQ6Q9Y2Z9 468 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 DOCK9Q9BZ29 2069 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 ATG2AQ2TAZ0 1938 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 CCDC85CA6NKD9 419 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 TRIM13O60858 407 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 LEFTY1O75610 366 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 RHOBTB1O94844 696 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 FSBPO95073 299 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 UNC5CO95185 931 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 PENKP01210 267 aaPredicted RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 MPOP05164 745 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 ZNF37AP17032 561 aaPredicted RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 NCF2P19878 526 aaPredicted RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 NSUN2Q08J23 767 aaKnown RBP eCLIP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 TAF1AQ15573 450 aaPredicted RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 CDKN3Q16667 212 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 KHDC1Q4VXA5 237 aaKnown RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 INO80DQ53TQ3 878 aaPredicted RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 ARSIQ5FYB1 569 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 TECRLQ5HYJ1 363 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 COL13A1Q5TAT6 717 aaPredicted RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 RETSATQ6NUM9 610 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 UGT3A1Q6NUS8 523 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 CRTC1Q6UUV9 634 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 SCIMPQ6UWF3 145 aa6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 PIWIL4Q7Z3Z4 852 aaKnown RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 PTCD2Q8WV60 388 aaKnown RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.97□□□□□ -1.29
LYSMD3-201ENST00000315948 A0A0J9YYE9 177 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 C2orf81A6NN90 581 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 KLF11O14901 512 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 AXIN1O15169 862 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 BIRC5O15392 142 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 DCXO43602 365 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 EPOP01588 193 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 TRBC1P01850 177 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 MTHFD2P13995 350 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 CHRM3P20309 590 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 PTSQ03393 145 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 FRG1Q14331 258 aaKnown RBP6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 ATG16L1Q676U5 607 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 ZYG11AQ6WRX3 759 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 CDK15Q96Q40 435 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 KXD1Q9BQD3 176 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 ZFYVE1Q9HBF4 777 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 NCKIPSDQ9NZQ3 722 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 TMPRSS11EQ9UL52 423 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 PIKFYVEQ9Y2I7 2098 aa6.96□□□□□ -1.29
LYSMD3-201ENST00000315948 C5orf67F2Z3F1 127 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 TULP3O75386 442 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 NDUFS3O75489 264 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 PAPSS2O95340 614 aaPredicted RBP6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 WISP3O95389 354 aaPredicted RBP6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 CRTAMO95727 393 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 CD1DP15813 335 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 FDXRP22570 491 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 MAGEA9P43362 315 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 POU4F1Q01851 419 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 DBN1Q16643 649 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 MYLK3Q32MK0 819 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 ATP13A5Q4VNC0 1218 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 TCHHL1Q5QJ38 904 aaPredicted RBP6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 SH2D4BQ5SQS7 431 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 ASRGL1Q7L266 308 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 MRGPRX3Q96LB0 322 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 NRTNQ99748 197 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 DDX50Q9BQ39 737 aaKnown RBP6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 ADGRE3Q9BY15 652 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 DUS2Q9NX74 493 aaKnown RBP6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 B4GALT6Q9UBX8 382 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 TCF20Q9UGU0 1960 aaKnown RBP6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 MTCL1Q9Y4B5 1905 aaKnown RBP6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 GOLGA4Q13439 2230 aaKnown RBP6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 COL4A3Q01955 1670 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 GRID2O43424 1007 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 TRIM16O95361 564 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 TSPAN12O95859 305 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 CYBBP04839 570 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 MSX2P35548 267 aaPredicted RBP6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 ETV3P41162 512 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 HK3P52790 923 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 NME5P56597 212 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 ELF3P78545 371 aaPredicted RBP6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 GAB4Q2WGN9 574 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 CCDC153Q494R4 210 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 IER5LQ5T953 404 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 SERPINA13PQ6UXR4 307 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 CYHR1Q6ZMK1 362 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 TRIM74Q86UV6 250 aa6.96□□□□□ -1.3
LYSMD3-201ENST00000315948 SERPINA9Q86WD7 417 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms