RNA–Protein interactions for RNA: ENST00000315781.9

SNAP47-201, Transcript of synaptosome associated protein 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNAP47, Length 2,367 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-201ENST00000315781 SPATA17Q96L03 361 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 SMIM14Q96QK8 99 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 ZNF696Q9H7X3 374 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 SEMA4BQ9NPR2 832 aaPredicted RBP18.62■□□□□ 0.57
SNAP47-201ENST00000315781 NDUFA13Q9P0J0 144 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 MAP10Q9P2G4 905 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 SEPT3Q9UH03 358 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 IKZF3Q9UKT9 509 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 RIMKLBQ9ULI2 386 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 CNOT6Q9ULM6 557 aaKnown RBP18.62■□□□□ 0.57
SNAP47-201ENST00000315781 SLC4A7Q9Y6M7 1214 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 ZFP37Q9Y6Q3 630 aaPredicted RBP18.62■□□□□ 0.57
SNAP47-201ENST00000315781 GRIA3P42263 894 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 GATMP50440 423 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 CLCQ05315 142 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 GPR17Q13304 367 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 TSNQ15631 228 aaKnown RBP18.62■□□□□ 0.57
SNAP47-201ENST00000315781 RNF180Q86T96 592 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 PHYKPLQ8IUZ5 450 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 MRPS26Q9BYN8 205 aaKnown RBP18.62■□□□□ 0.57
SNAP47-201ENST00000315781 NOL11Q9H8H0 719 aaKnown RBP18.62■□□□□ 0.57
SNAP47-201ENST00000315781 SYTL2Q9HCH5 934 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 HCSTQ9UBK5 93 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 UBA2Q9UBT2 640 aaPredicted RBP18.62■□□□□ 0.57
SNAP47-201ENST00000315781 POLG2Q9UHN1 485 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 MED16Q9Y2X0 877 aa18.62■□□□□ 0.57
SNAP47-201ENST00000315781 TMEM88BA6NKF7 163 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 ANGPT2O15123 496 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 NDUFS3O75489 264 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 CRCPO75575 148 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 HGFP14210 728 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 PSMC3P17980 439 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 CAPN3P20807 821 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 CALRP27797 417 aaKnown RBP18.61■□□□□ 0.57
SNAP47-201ENST00000315781 KPNA1P52294 538 aaPredicted RBP18.61■□□□□ 0.57
SNAP47-201ENST00000315781 LCP2Q13094 533 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 IKBKEQ14164 716 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 SETMARQ53H47 684 aaPredicted RBP18.61■□□□□ 0.57
SNAP47-201ENST00000315781 METTL25Q8N6Q8 603 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 NMD3Q96D46 503 aaKnown RBP18.61■□□□□ 0.57
SNAP47-201ENST00000315781 CIB1Q99828 191 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 EFHD1Q9BUP0 239 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 GRIP2Q9C0E4 1043 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 DERL2Q9GZP9 239 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 MAGEH1Q9H213 219 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 EPB41L1Q9H4G0 881 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 NMRK2Q9NPI5 230 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 HACD3Q9P035 362 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 NDUFAF1Q9Y375 327 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 NCF1BA6NI72 391 aaPredicted RBP18.61■□□□□ 0.57
SNAP47-201ENST00000315781 NCF1CA8MVU1 366 aaPredicted RBP18.61■□□□□ 0.57
SNAP47-201ENST00000315781 NME4O00746 187 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 ACSL4O60488 711 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 ECI2O75521 394 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 ZDHHC11BP0C7U3 371 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 NCF1P14598 390 aaPredicted RBP18.61■□□□□ 0.57
SNAP47-201ENST00000315781 LBPP18428 481 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 ATP6V1B2P21281 511 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 RPS24P62847 133 aaKnown RBP18.61■□□□□ 0.57
SNAP47-201ENST00000315781 ECT2LQ008S8 904 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 CAP1Q01518 475 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 RAD51Q06609 339 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 RPS6KA2Q15349 733 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 AFTPHQ6ULP2 937 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 RBM44Q6ZP01 1051 aaKnown RBP18.61■□□□□ 0.57
SNAP47-201ENST00000315781 MDGA1Q8NFP4 955 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 DUS3LQ96G46 650 aaKnown RBP18.61■□□□□ 0.57
SNAP47-201ENST00000315781 ZNF597Q96LX8 424 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 GPATCH1Q9BRR8 931 aaKnown RBP18.61■□□□□ 0.57
SNAP47-201ENST00000315781 SLC2A11Q9BYW1 496 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 NACA2Q9H009 215 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 VCX3AQ9NNX9 186 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 TMEM161AQ9NX61 479 aa18.61■□□□□ 0.57
SNAP47-201ENST00000315781 LCHNA4D1U4 455 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 FAM155AB1AL88 458 aaPredicted RBP18.6■□□□□ 0.57
SNAP47-201ENST00000315781 NT5C1B-RDH14C9J2C7 533 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 CDC7O00311 574 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 TIPRLO75663 272 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 CDKN1CP49918 316 aaPredicted RBP18.6■□□□□ 0.57
SNAP47-201ENST00000315781 OXCT1P55809 520 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 CAPRIN1Q14444 709 aaKnown RBP18.6■□□□□ 0.57
SNAP47-201ENST00000315781 SLC5A9Q2M3M2 681 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 NADK2Q4G0N4 442 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 RTP2Q5QGT7 225 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 HMBOX1Q6NT76 420 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 OR2T34Q8NGX1 318 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 OR2T3Q8NH03 318 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 CANT1Q8WVQ1 401 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 SLC45A3Q96JT2 553 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 ZFRQ96KR1 1074 aaKnown RBP18.6■□□□□ 0.57
SNAP47-201ENST00000315781 PSKH2Q96QS6 385 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 GPR21Q99679 349 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 SLC29A1Q99808 456 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 HOPXQ9BPY8 73 aaPredicted RBP18.6■□□□□ 0.57
SNAP47-201ENST00000315781 MARCH5Q9NX47 278 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 NPEPPSL1A6NEC2 478 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 SLC38A8A6NNN8 435 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 INSIG1O15503 277 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 FAM110BQ8TC76 370 aa18.6■□□□□ 0.57
SNAP47-201ENST00000315781 DGCR14Q96DF8 476 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms